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Imaging activity in astrocytes and neurons with genetically encoded calcium indicators following in utero electroporation

Overview of attention for article published in Frontiers in Molecular Neuroscience, April 2015
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  • Above-average Attention Score compared to outputs of the same age (55th percentile)
  • Good Attention Score compared to outputs of the same age and source (78th percentile)

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Title
Imaging activity in astrocytes and neurons with genetically encoded calcium indicators following in utero electroporation
Published in
Frontiers in Molecular Neuroscience, April 2015
DOI 10.3389/fnmol.2015.00010
Pubmed ID
Authors

J. Michael Gee, Meredith B. Gibbons, Marsa Taheri, Sierra Palumbos, S. Craig Morris, Roy M. Smeal, Katherine F. Flynn, Michael N. Economo, Christian G. Cizek, Mario R. Capecchi, Petr Tvrdik, Karen S. Wilcox, John A. White

Abstract

Complex interactions between networks of astrocytes and neurons are beginning to be appreciated, but remain poorly understood. Transgenic mice expressing fluorescent protein reporters of cellular activity, such as the GCaMP family of genetically encoded calcium indicators (GECIs), have been used to explore network behavior. However, in some cases, it may be desirable to use long-established rat models that closely mimic particular aspects of human conditions such as Parkinson's disease and the development of epilepsy following status epilepticus. Methods for expressing reporter proteins in the rat brain are relatively limited. Transgenic rat technologies exist but are fairly immature. Viral-mediated expression is robust but unstable, requires invasive injections, and only works well for fairly small genes (<5 kb). In utero electroporation (IUE) offers a valuable alternative. IUE is a proven method for transfecting populations of astrocytes and neurons in the rat brain without the strict limitations on transgene size. We built a toolset of IUE plasmids carrying GCaMP variants 3, 6s, or 6f driven by CAG and targeted to the cytosol or the plasma membrane. Because low baseline fluorescence of GCaMP can hinder identification of transfected cells, we included the option of co-expressing a cytosolic tdTomato protein. A binary system consisting of a plasmid carrying a piggyBac inverted terminal repeat (ITR)-flanked CAG-GCaMP-IRES-tdTomato cassette and a separate plasmid encoding for expression of piggyBac transposase was employed to stably express GCaMP and tdTomato. The plasmids were co-electroporated on embryonic days 13.5-14.5 and astrocytic and neuronal activity was subsequently imaged in acute or cultured brain slices prepared from the cortex or hippocampus. Large spontaneous transients were detected in slices obtained from rats of varying ages up to 127 days. In this report, we demonstrate the utility of this toolset for interrogating astrocytic and neuronal activity in the rat brain.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 154 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 2 1%
Switzerland 1 <1%
Germany 1 <1%
Japan 1 <1%
France 1 <1%
Unknown 148 96%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 48 31%
Researcher 21 14%
Student > Master 13 8%
Student > Doctoral Student 12 8%
Student > Bachelor 11 7%
Other 20 13%
Unknown 29 19%
Readers by discipline Count As %
Agricultural and Biological Sciences 44 29%
Neuroscience 43 28%
Medicine and Dentistry 15 10%
Biochemistry, Genetics and Molecular Biology 7 5%
Engineering 4 3%
Other 6 4%
Unknown 35 23%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 29 May 2015.
All research outputs
#12,731,100
of 22,805,349 outputs
Outputs from Frontiers in Molecular Neuroscience
#1,113
of 2,870 outputs
Outputs of similar age
#117,252
of 264,037 outputs
Outputs of similar age from Frontiers in Molecular Neuroscience
#3
of 14 outputs
Altmetric has tracked 22,805,349 research outputs across all sources so far. This one is in the 43rd percentile – i.e., 43% of other outputs scored the same or lower than it.
So far Altmetric has tracked 2,870 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.7. This one has gotten more attention than average, scoring higher than 60% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 264,037 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 55% of its contemporaries.
We're also able to compare this research output to 14 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 78% of its contemporaries.