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Quantitative analysis of proteome extracted from barley crowns grown under different drought conditions

Overview of attention for article published in Frontiers in Plant Science, June 2015
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Title
Quantitative analysis of proteome extracted from barley crowns grown under different drought conditions
Published in
Frontiers in Plant Science, June 2015
DOI 10.3389/fpls.2015.00479
Pubmed ID
Authors

Pavel Vítámvás, Milan O. Urban, Zbynek Škodáček, Klára Kosová, Iva Pitelková, Jan Vítámvás, Jenny Renaut, Ilja T. Prášil

Abstract

Barley cultivar Amulet was used to study the quantitative proteome changes through different drought conditions utilizing two-dimensional difference gel electrophoresis (2D-DIGE). Plants were cultivated for 10 days under different drought conditions. To obtain control and differentially drought-treated plants, the soil water content was kept at 65, 35, and 30% of soil water capacity (SWC), respectively. Osmotic potential, water saturation deficit, (13)C discrimination, and dehydrin accumulation were monitored during sampling of the crowns for proteome analysis. Analysis of the 2D-DIGE gels revealed 105 differentially abundant spots; most were differentially abundant between the controls and drought-treated plants, and 25 spots displayed changes between both drought conditions. Seventy-six protein spots were successfully identified by tandem mass spectrometry. The most frequent functional categories of the identified proteins can be put into the groups of: stress-associated proteins, amino acid metabolism, carbohydrate metabolism, as well as DNA and RNA regulation and processing. Their possible role in the response of barley to drought stress is discussed. Our study has shown that under drought conditions barley cv. Amulet decreased its growth and developmental rates, displayed a shift from aerobic to anaerobic metabolism, and exhibited increased levels of several protective proteins. Comparison of the two drought treatments revealed plant acclimation to milder drought (35% SWC); but plant damage under more severe drought treatment (30% SWC). The results obtained revealed that cv. Amulet is sensitive to drought stress. Additionally, four spots revealing a continuous and significant increase with decreasing SWC (UDP-glucose 6-dehydrogenase, glutathione peroxidase, and two non-identified) could be good candidates for testing of their protein phenotyping capacity together with proteins that were significantly distinguished in both drought treatments.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 62 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
India 1 2%
Unknown 61 98%

Demographic breakdown

Readers by professional status Count As %
Researcher 17 27%
Student > Ph. D. Student 11 18%
Student > Doctoral Student 5 8%
Other 4 6%
Student > Bachelor 2 3%
Other 9 15%
Unknown 14 23%
Readers by discipline Count As %
Agricultural and Biological Sciences 25 40%
Biochemistry, Genetics and Molecular Biology 9 15%
Psychology 3 5%
Environmental Science 2 3%
Engineering 2 3%
Other 5 8%
Unknown 16 26%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 30 June 2015.
All research outputs
#22,758,309
of 25,373,627 outputs
Outputs from Frontiers in Plant Science
#19,712
of 24,597 outputs
Outputs of similar age
#236,297
of 277,312 outputs
Outputs of similar age from Frontiers in Plant Science
#216
of 287 outputs
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