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SKESA: strategic k-mer extension for scrupulous assemblies | Genome Biology | Full Text https://t.co/jpprc8pFfY
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@ZaminIqbal It's not only E. coli, but the SKESA paper in Genome Biology used the FDA-ARGOS dataset which has complete genomes + Illumina read sets I believe https://t.co/dlpmnUmeCF
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Unsure how many people are de novo assembler, but a search guided by a desire for de novo assembly extension turned up a new assembler by NIH investigators: https://t.co/M2y6u1KDLe Will fire it up and compare to my SPAdes/Megahit, but anyone else tried it