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Single-base resolution analysis of DNA epigenome via high-throughput sequencing

Overview of attention for article published in Science China Life Sciences, January 2016
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  • Good Attention Score compared to outputs of the same age (75th percentile)
  • High Attention Score compared to outputs of the same age and source (83rd percentile)

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4 X users
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1 patent

Citations

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8 Dimensions

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38 Mendeley
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Title
Single-base resolution analysis of DNA epigenome via high-throughput sequencing
Published in
Science China Life Sciences, January 2016
DOI 10.1007/s11427-016-5013-x
Pubmed ID
Authors

Jinying Peng, Bo Xia, Chengqi Yi

Abstract

Epigenetic changes caused by DNA methylation and histone modifications play important roles in the regulation of various cellular processes and development. Recent discoveries of 5-methylcytosine (5mC) oxidation derivatives including 5-hydroxymethylcytosine (5hmC), 5-formylcytsine (5fC) and 5-carboxycytosine (5caC) in mammalian genome further expand our understanding of the epigenetic regulation. Analysis of DNA modification patterns relies increasingly on sequencing-based profiling methods. A number of different approaches have been established to map the DNA epigenomes with single-base resolution, as represented by the bisulfite-based methods, such as classical bisulfite sequencing (BS-seq), TAB-seq (TET-assisted bisulfite sequencing), oxBS-seq (oxidative bisulfite sequencing) and etc. These methods have been used to generate base-resolution maps of 5mC and its oxidation derivatives in genomic samples. The focus of this review will be to discuss the chemical methodologies that have been developed to detect the cytosine derivatives in the genomic DNA.

X Demographics

X Demographics

The data shown below were collected from the profiles of 4 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 38 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Brazil 1 3%
Unknown 37 97%

Demographic breakdown

Readers by professional status Count As %
Student > Master 8 21%
Student > Ph. D. Student 7 18%
Student > Bachelor 5 13%
Researcher 5 13%
Professor > Associate Professor 3 8%
Other 5 13%
Unknown 5 13%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 14 37%
Agricultural and Biological Sciences 8 21%
Chemistry 4 11%
Environmental Science 2 5%
Medicine and Dentistry 2 5%
Other 2 5%
Unknown 6 16%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 6. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 19 March 2020.
All research outputs
#6,525,040
of 25,464,544 outputs
Outputs from Science China Life Sciences
#321
of 1,279 outputs
Outputs of similar age
#97,022
of 405,809 outputs
Outputs of similar age from Science China Life Sciences
#7
of 37 outputs
Altmetric has tracked 25,464,544 research outputs across all sources so far. This one has received more attention than most of these and is in the 74th percentile.
So far Altmetric has tracked 1,279 research outputs from this source. They typically receive more attention than average, with a mean Attention Score of 9.3. This one has gotten more attention than average, scoring higher than 74% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 405,809 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 75% of its contemporaries.
We're also able to compare this research output to 37 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 83% of its contemporaries.