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Yeast Systems Biology

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Cover of 'Yeast Systems Biology'

Table of Contents

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    Book Overview
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    Chapter 1 Yeast Systems Biology: The Continuing Challenge of Eukaryotic Complexity
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    Chapter 2 Capture of Ribonucleotides in Yeast Genomic DNA Using Ribose-Seq
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    Chapter 3 Method for Multiplexed Integration of Synergistic Alleles and Metabolic Pathways in Yeasts via CRISPR-Cas9
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    Chapter 4 Ultrahigh-Density Screens for Genome-Wide Yeast EMAPs in a Single Plate
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    Chapter 5 Epi-ID: Systematic and Direct Screening for Chromatin Regulators in Yeast by Barcode-ChIP-Seq
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    Chapter 6 Transcript Profiling Analysis Through Paired-End Ditag (PET) Approach Coupled with Deep Sequencing Reveals Transcriptome Complexity in Yeast
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    Chapter 7 RNA Sequencing Best Practices: Experimental Protocol and Data Analysis
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    Chapter 8 Advanced Methods for the Analysis of Altered Pre-mRNA Splicing in Yeast and Disease
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    Chapter 9 PAT-Seq: A Method for Simultaneous Quantitation of Gene Expression, Poly(A)-Site Selection and Poly(A)-Length Distribution in Yeast Transcriptomes
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    Chapter 10 Mapping the Saccharomyces cerevisiae Spatial Proteome with High Resolution Using hyperLOPIT
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    Chapter 11 Data-Independent Acquisition for Yeast Glycoproteomics
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    Chapter 12 Protein–Protein Interaction Profiling in Candida albicans Revealed by Biochemical Purification–Mass Spectrometry (BP/MS)
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    Chapter 13 Probing the RNA-Binding Proteome from Yeast to Man: Major Advances and Challenges
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    Chapter 14 Metabolomic Analysis of Yeast and Human Cells: Latest Advances and Challenges
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    Chapter 15 Measuring the Activity of Plasma Membrane and Vacuolar Transporters in Yeast
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    Chapter 16 Self-Establishing Communities: A Yeast Model to Study the Physiological Impact of Metabolic Cooperation in Eukaryotic Cells
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    Chapter 17 Data Management in Computational Systems Biology: Exploring Standards, Tools, Databases, and Packaging Best Practices
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    Chapter 18 Rational Design and Methods of Analysis for the Study of Short- and Long-Term Dynamic Responses of Eukaryotic Systems
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    Chapter 19 Genome-Scale Metabolic Modeling from Yeast to Human Cell Models of Complex Diseases: Latest Advances and Challenges
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    Chapter 20 Next-Generation Genome-Scale Models Incorporating Multilevel ‘Omics Data: From Yeast to Human
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    Chapter 21 Advanced Modeling of Cellular Proliferation: Toward a Multi-scale Framework Coupling Cell Cycle to Metabolism by Integrating Logical and Constraint-Based Models
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    Chapter 22 Yeast Genome Screening and Methods for the Discovery of Metabolic Pathways Involved in a Phenotypic Response to Anticancer Agents
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    Chapter 23 Advanced Yeast Models of Familial Alzheimer Disease Expressing FAD-Linked Presenilin to Screen Mutations and γ-Secretase Modulators
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    Chapter 24 From Yeast to Humans: Leveraging New Approaches in Yeast to Accelerate Discovery of Therapeutic Targets for Synucleinopathies
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