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InSilico DB genomic datasets hub: an efficient starting point for analyzing genome-wide studies in GenePattern, Integrative Genomics Viewer, and R/Bioconductor

Overview of attention for article published in Genome Biology, November 2012
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (96th percentile)
  • High Attention Score compared to outputs of the same age and source (80th percentile)

Mentioned by

news
1 news outlet
blogs
1 blog
twitter
11 X users
patent
1 patent
wikipedia
1 Wikipedia page

Citations

dimensions_citation
39 Dimensions

Readers on

mendeley
138 Mendeley
citeulike
12 CiteULike
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Title
InSilico DB genomic datasets hub: an efficient starting point for analyzing genome-wide studies in GenePattern, Integrative Genomics Viewer, and R/Bioconductor
Published in
Genome Biology, November 2012
DOI 10.1186/gb-2012-13-11-r104
Pubmed ID
Authors

Alain Coletta, Colin Molter, Robin Duqué, David Steenhoff, Jonatan Taminau, Virginie de Schaetzen, Stijn Meganck, Cosmin Lazar, David Venet, Vincent Detours, Ann Nowé, Hugues Bersini, David Y Weiss Solís

Abstract

ABSTRACT: Genomics datasets are increasingly useful for gaining biomedical insights, with adoption in the clinic underway. However, multiple hurdles related to data management stand in the way of their efficient large-scale utilization. The solution proposed is a web-based data storage hub. Having clear focus, flexibility and adaptability, InSilico DB seamlessly connects genomics dataset repositories to state-of-the-art and free GUI and command-line data analysis tools. The InSilico DB platform is a powerful collaborative environment, with advanced capabilities for biocuration, dataset sharing, and dataset subsetting and combination. InSilico DB is available from https://insilicodb.org.

X Demographics

X Demographics

The data shown below were collected from the profiles of 11 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 138 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 3 2%
Japan 2 1%
Belgium 2 1%
Korea, Republic of 1 <1%
Ireland 1 <1%
Brazil 1 <1%
Portugal 1 <1%
Germany 1 <1%
France 1 <1%
Other 2 1%
Unknown 123 89%

Demographic breakdown

Readers by professional status Count As %
Researcher 49 36%
Student > Ph. D. Student 23 17%
Student > Master 14 10%
Professor > Associate Professor 11 8%
Student > Bachelor 8 6%
Other 19 14%
Unknown 14 10%
Readers by discipline Count As %
Agricultural and Biological Sciences 64 46%
Biochemistry, Genetics and Molecular Biology 15 11%
Computer Science 14 10%
Medicine and Dentistry 10 7%
Engineering 4 3%
Other 8 6%
Unknown 23 17%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 30. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 15 May 2023.
All research outputs
#1,298,782
of 25,373,627 outputs
Outputs from Genome Biology
#1,004
of 4,467 outputs
Outputs of similar age
#10,348
of 285,521 outputs
Outputs of similar age from Genome Biology
#9
of 45 outputs
Altmetric has tracked 25,373,627 research outputs across all sources so far. Compared to these this one has done particularly well and is in the 94th percentile: it's in the top 10% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 4,467 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 27.6. This one has done well, scoring higher than 77% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 285,521 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 96% of its contemporaries.
We're also able to compare this research output to 45 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 80% of its contemporaries.