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A de novo assembly of the newt transcriptome combined with proteomic validation identifies new protein families expressed during tissue regeneration

Overview of attention for article published in Genome Biology (Online Edition), January 2013
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About this Attention Score

  • In the top 5% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (98th percentile)

Mentioned by

news
4 news outlets
blogs
5 blogs
twitter
14 tweeters
facebook
1 Facebook page

Readers on

mendeley
210 Mendeley
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Title
A de novo assembly of the newt transcriptome combined with proteomic validation identifies new protein families expressed during tissue regeneration
Published in
Genome Biology (Online Edition), January 2013
DOI 10.1186/gb-2013-14-2-r16
Pubmed ID
Authors

Mario Looso, Jens Preussner, Konstantinos Sousounis, Marc Bruckskotten, Christian S Michel, Ettore Lignelli, Richard Reinhardt, Sabrina Höffner, Marcus Krüger, Panagiotis A Tsonis, Thilo Borchardt, Thomas Braun

Abstract

Notophthalmus viridescens, an urodelian amphibian, represents an excellent model organism to study regenerative processes, but mechanistic insights into molecular processes driving regeneration have been hindered by a paucity and poor annotation of coding nucleotide sequences. The enormous genome size and the lack of a closely related reference genome have so far prevented assembly of the urodelian genome.

Twitter Demographics

The data shown below were collected from the profiles of 14 tweeters who shared this research output. Click here to find out more about how the information was compiled.

Mendeley readers

The data shown below were compiled from readership statistics for 210 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 8 4%
United Kingdom 4 2%
Sweden 3 1%
Germany 2 <1%
Brazil 2 <1%
Netherlands 2 <1%
Japan 2 <1%
Russia 1 <1%
Denmark 1 <1%
Other 1 <1%
Unknown 184 88%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 65 31%
Researcher 54 26%
Student > Master 18 9%
Student > Bachelor 15 7%
Student > Doctoral Student 14 7%
Other 37 18%
Unknown 7 3%
Readers by discipline Count As %
Agricultural and Biological Sciences 131 62%
Biochemistry, Genetics and Molecular Biology 40 19%
Neuroscience 8 4%
Medicine and Dentistry 7 3%
Computer Science 6 3%
Other 9 4%
Unknown 9 4%

Attention Score in Context

This research output has an Altmetric Attention Score of 74. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 05 May 2014.
All research outputs
#244,577
of 14,003,034 outputs
Outputs from Genome Biology (Online Edition)
#207
of 3,102 outputs
Outputs of similar age
#2,284
of 146,141 outputs
Outputs of similar age from Genome Biology (Online Edition)
#1
of 4 outputs
Altmetric has tracked 14,003,034 research outputs across all sources so far. Compared to these this one has done particularly well and is in the 98th percentile: it's in the top 5% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 3,102 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 24.0. This one has done particularly well, scoring higher than 93% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 146,141 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 98% of its contemporaries.
We're also able to compare this research output to 4 others from the same source and published within six weeks on either side of this one. This one has scored higher than all of them