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Characterization of an Ancient Lepidopteran Lateral Gene Transfer

Overview of attention for article published in PLOS ONE, March 2013
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  • Above-average Attention Score compared to outputs of the same age and source (52nd percentile)

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Title
Characterization of an Ancient Lepidopteran Lateral Gene Transfer
Published in
PLOS ONE, March 2013
DOI 10.1371/journal.pone.0059262
Pubmed ID
Authors

David Wheeler, Amanda J. Redding, John H. Werren

Abstract

Bacteria to eukaryote lateral gene transfers (LGT) are an important potential source of material for the evolution of novel genetic traits. The explosion in the number of newly sequenced genomes provides opportunities to identify and characterize examples of these lateral gene transfer events, and to assess their role in the evolution of new genes. In this paper, we describe an ancient lepidopteran LGT of a glycosyl hydrolase family 31 gene (GH31) from an Enterococcus bacteria. PCR amplification between the LGT and a flanking insect gene confirmed that the GH31 was integrated into the Bombyx mori genome and was not a result of an assembly error. Database searches in combination with degenerate PCR on a panel of 7 lepidopteran families confirmed that the GH31 LGT event occurred deep within the Order approximately 65-145 million years ago. The most basal species in which the LGT was found is Plutella xylostella (superfamily: Yponomeutoidea). Array data from Bombyx mori shows that GH31 is expressed, and low dN/dS ratios indicates the LGT coding sequence is under strong stabilizing selection. These findings provide further support for the proposition that bacterial LGTs are relatively common in insects and likely to be an underappreciated source of adaptive genetic material.

X Demographics

X Demographics

The data shown below were collected from the profiles of 5 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 58 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Germany 1 2%
Australia 1 2%
Czechia 1 2%
United Kingdom 1 2%
Estonia 1 2%
United States 1 2%
Unknown 52 90%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 13 22%
Researcher 13 22%
Student > Bachelor 6 10%
Student > Master 6 10%
Professor > Associate Professor 5 9%
Other 7 12%
Unknown 8 14%
Readers by discipline Count As %
Agricultural and Biological Sciences 35 60%
Biochemistry, Genetics and Molecular Biology 9 16%
Chemical Engineering 1 2%
Veterinary Science and Veterinary Medicine 1 2%
Arts and Humanities 1 2%
Other 1 2%
Unknown 10 17%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 31 March 2013.
All research outputs
#14,126,445
of 24,953,268 outputs
Outputs from PLOS ONE
#119,823
of 216,204 outputs
Outputs of similar age
#106,084
of 202,353 outputs
Outputs of similar age from PLOS ONE
#2,527
of 5,437 outputs
Altmetric has tracked 24,953,268 research outputs across all sources so far. This one is in the 43rd percentile – i.e., 43% of other outputs scored the same or lower than it.
So far Altmetric has tracked 216,204 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 15.7. This one is in the 43rd percentile – i.e., 43% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 202,353 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 47th percentile – i.e., 47% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 5,437 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 52% of its contemporaries.