Title |
Clever generation of rich SPARQL queries from annotated relational schema: application to Semantic Web Service creation for biological databases
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Published in |
BMC Bioinformatics, April 2013
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DOI | 10.1186/1471-2105-14-126 |
Pubmed ID | |
Authors |
Julien Wollbrett, Pierre Larmande, Frédéric de Lamotte, Manuel Ruiz |
Abstract |
In recent years, a large amount of "-omics" data have been produced. However, these data are stored in many different species-specific databases that are managed by different institutes and laboratories. Biologists often need to find and assemble data from disparate sources to perform certain analyses. Searching for these data and assembling them is a time-consuming task. The Semantic Web helps to facilitate interoperability across databases. A common approach involves the development of wrapper systems that map a relational database schema onto existing domain ontologies. However, few attempts have been made to automate the creation of such wrappers. |
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Geographical breakdown
Country | Count | As % |
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United States | 3 | 27% |
United Kingdom | 2 | 18% |
Germany | 1 | 9% |
India | 1 | 9% |
France | 1 | 9% |
Turkey | 1 | 9% |
Unknown | 2 | 18% |
Demographic breakdown
Type | Count | As % |
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Members of the public | 6 | 55% |
Scientists | 5 | 45% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
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Netherlands | 1 | 2% |
Brazil | 1 | 2% |
Sweden | 1 | 2% |
United Kingdom | 1 | 2% |
Greece | 1 | 2% |
United States | 1 | 2% |
Unknown | 40 | 87% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Researcher | 16 | 35% |
Other | 5 | 11% |
Student > Bachelor | 4 | 9% |
Student > Ph. D. Student | 4 | 9% |
Student > Doctoral Student | 3 | 7% |
Other | 9 | 20% |
Unknown | 5 | 11% |
Readers by discipline | Count | As % |
---|---|---|
Computer Science | 16 | 35% |
Agricultural and Biological Sciences | 15 | 33% |
Engineering | 3 | 7% |
Biochemistry, Genetics and Molecular Biology | 2 | 4% |
Environmental Science | 1 | 2% |
Other | 3 | 7% |
Unknown | 6 | 13% |