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DNA replication

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Cover of 'DNA replication'

Table of Contents

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    Book Overview
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    Chapter 1 DNA replication initiation.
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    Chapter 2 DNA Replication Fork Proteins
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    Chapter 3 Random and Site-Specific Replication Termination
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    Chapter 4 Checkpoint Regulation of DNA Replication
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    Chapter 5 Introduction to Molecular Combing: Genomics, DNA Replication, and Cancer
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    Chapter 6 Replication Initiation Point Mapping: Approach and Implications
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    Chapter 7 DNA Replication
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    Chapter 8 Topological Analysis of Plasmid DNA Replication Intermediates Using Two-Dimensional Agarose Gels
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    Chapter 9 DNA Replication
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    Chapter 10 Chromatin Immunoprecipitation of Replication Factors Moving with the Replication Fork
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    Chapter 11 Density Transfer as a Method to Analyze the Progression of DNA Replication Forks
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    Chapter 12 High-Resolution Mapping of Points of Site-Specific Replication Stalling
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    Chapter 13 DNA Replication in Nucleus-Free Xenopus Egg Extracts
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    Chapter 14 ChIP-Chip to Analyze the Binding of Replication Proteins to Chromatin Using Oligonucleotide DNA Microarrays
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    Chapter 15 Analyzing Origin Activation Patterns by Copy Number Change Experiments
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    Chapter 16 Detection of Replication Origins Using Comparative Genomics and Recombinational ARS Assay
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    Chapter 17 Isolation of Restriction Fragments Containing Origins of Replication from Complex Genomes
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    Chapter 18 Application of Alkaline Sucrose Gradient Centrifugation in the Analysis of DNA Replication After DNA Damage
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    Chapter 19 Isolation of Recombinant DNA Elongation Proteins
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    Chapter 20 In Vitro Assays for Studying Helicase Activities
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    Chapter 21 The Use of 2-Aminopurine Fluorescence to Study DNA Polymerase Function
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    Chapter 22 DNA Replication
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    Chapter 23 Visualization of DNA Replication Sites in Mammalian Nuclei
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    Chapter 24 Cell-Cycle Synchrony for Analysis of S. pombe DNA Replication
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    Chapter 25 Measuring DNA Content by Flow Cytometry in Fission Yeast
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    Chapter 26 Microscopy techniques to examine DNA replication in fission yeast.
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    Chapter 27 Using the DHFR Heat-Inducible Degron for Protein Inactivation in Schizosaccharomyces pombe
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    Chapter 28 Assays Used to Study the DNA Replication Checkpoint in Fission Yeast
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    Chapter 29 Incorporation of thymidine analogs for studying replication kinetics in fission yeast
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    Chapter 30 The Fast-Halo Assay for the Assessment of DNA Damage at the Single-Cell Level
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    Chapter 31 Monitoring Homologous Recombination Following Replication Fork Perturbation in the Fission Yeast Schizosaccharomyces pombe
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    Chapter 32 Computational Methods to Study Kinetics of DNA Replication
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    Chapter 33 Use of DNA combing to study DNA replication in Xenopus and human cell-free systems.
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    Chapter 34 Electron Microscopy Methods for Studying In Vivo DNA Replication Intermediates
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    Chapter 35 Determining the Replication Dynamics of Specific Gene Loci by Single-Molecule Analysis of Replicated DNA
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    Chapter 36 Use of DNA Combing for Studying DNA Replication In Vivo in Yeast and Mammalian Cells
Attention for Chapter 26: Microscopy techniques to examine DNA replication in fission yeast.
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Chapter title
Microscopy techniques to examine DNA replication in fission yeast.
Chapter number 26
Book title
DNA Replication
Published in
Methods in molecular biology, July 2009
DOI 10.1007/978-1-60327-815-7_26
Pubmed ID
Book ISBNs
978-1-60327-814-0, 978-1-60327-815-7
Authors

Green MD, Sabatinos SA, Forsburg SL, Green, Marc D., Sabatinos, Sarah A., Forsburg, Susan L., Marc D. Green, Sarah A. Sabatinos, Susan L. Forsburg

Abstract

Temporal and spatial visualization of replication proteins and associated structures within the narrow confines of a yeast nucleus is technically challenging. Choosing the appropriate method depends upon the parameters of the experiment, the nature of the molecules to be observed, and the hypothesis to be tested. In this chapter, we review three broad types of visualization: whole cell fluorescence or immunofluorescence, which is useful for questions of timing and chromatin association; nuclear spreads, which provide greater resolution within the chromatin for colocalization and region-specific effects; and chromatin fibers, which allow observation of labeled proteins and newly synthesized DNA on a linear chromosome. We discuss applications of these protocols and some considerations for choosing methods and fluorophores.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 2 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 2 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 1 50%
Unknown 1 50%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 1 50%
Unknown 1 50%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 07 June 2022.
All research outputs
#7,451,942
of 22,782,096 outputs
Outputs from Methods in molecular biology
#2,316
of 13,094 outputs
Outputs of similar age
#37,157
of 109,949 outputs
Outputs of similar age from Methods in molecular biology
#4
of 16 outputs
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