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@NM_Reid @gokcumen @DevoEvoMed @PlantEvolution @lpachter First, to give a more broad perspective, GWAS with k-mers was applied to bacteria for years. Similar to plants, you can benefit a lot by not depending on one reference genome. For example by Samuel S
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RT @pathogenomenick: GWAS is becoming a fashionable technique in population bacterial genomics now ... e.g. http://t.co/cCMaHVjrlu http://t…
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looking for host associated "words" in the ST-45 complex: see https://t.co/iIi8XcY7dl