Computational Methods for SNPs and Haplotype Inference : DIMACS/RECOMB Satellite Workshop, Piscataway, NJ, USA, November 21-22, 2002. Revised Papers

Table of Contents

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   Book Overview
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   Chapter 1 Trisomic Phase Inference
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   Chapter 2 An Overview of Combinatorial Methods for Haplotype Inference
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   Chapter 3 A Survey of Computational Methods for Determining Haplotypes
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   Chapter 4 Haplotype Inference and Its Application in Linkage Disequilibrium Mapping
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   Chapter 5 Inferring Piecewise Ancestral History from Haploid Sequences
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   Chapter 6 Haplotype Blocks in Small Populations
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   Chapter 7 Simulating a Coalescent Process with Recombination and Ascertainment
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   Chapter 8 Dynamic Programming Algorithms for Haplotype Block Partitioning and Tag SNP Selection Using Haplotype Data or Genotype Data
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    Chapter 9 Parametric Bootstrap for Assessment of Goodness of Fit of Models for Block Haplotype Structure
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    Chapter 10 A Coalescent-Based Approach for Complex Disease Mapping
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    Chapter 11 Haplotyping as Perfect Phylogeny
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    Chapter 12 Exhaustive Enumeration and Bayesian Phase Inference
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    Chapter 13 How Does Choice of Polymorphism Influence Estimation of LD and Mapping?
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    Chapter 14 Haplotype Inference in Random Population Samples
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    Chapter 15 Bayesian Methods for Statistical Reconstruction of Haplotypes
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    Chapter 16 Combinatorial Approaches to Haplotype Inference
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    Chapter 17 Large Scale Recovery of Haplotypes from Genotype Data Using Imperfect Phylogeny
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    Chapter 18 Haplotype Inference and Haplotype Information
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    Chapter 19 Multi-locus Linkage Disequilibrium and Haplotype-Based Tests of Association
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    Chapter 20 The Pattern of Polymorphism on Human Chromosome 21
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    Chapter 21 Use of a Local Approximation to the Ancestral Recombination Graph for Fine Mapping Disease Genes
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    Chapter 22 Insights into Recombination from Patterns of Linkage Disequilibrium
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    Chapter 23 Joint Bayesian Estimation of Mutation Location and Age Using Linkage Disequilibrium
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    Chapter 24 Evolutionary-Based Association Analysis Using Haplotype Data
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    Chapter 25 Inferring Piecewise Ancestral History from Haploid Sequences
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    Chapter 26 Testing for Differences in Haplotype Frequencies in Case-Control Studies
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    Chapter 27 Haplotypes, Hotspots, and a Multilocus Model for Linkage Disequilibrium
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    Chapter 28 Dynamic Programming Algorithms for Haplotype Block Partition and Applications to Association Studies
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    Chapter 29 Genome Sharing in Small Populations
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    Chapter 30 Patterns of Linkage Disequilibrium across Human Chromosomes 6, 21, AND 22
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    Chapter 31 A Software System for Automated and Visual Analysis of Functionally Annotated Haplotypes
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    Chapter 32 Assessment of Goodness of Fit of Models for Block Haplotype Structure