Title |
The Open Anatomy Browser: A Collaborative Web-Based Viewer for Interoperable Anatomy Atlases
|
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Published in |
Frontiers in Neuroinformatics, March 2017
|
DOI | 10.3389/fninf.2017.00022 |
Pubmed ID | |
Authors |
Michael Halle, Valentin Demeusy, Ron Kikinis |
Abstract |
The Open Anatomy Browser (OABrowser) is an open source, web-based, zero-installation anatomy atlas viewer based on current web browser technologies and evolving anatomy atlas interoperability standards. OABrowser displays three-dimensional anatomical models, image cross-sections of labeled structures and source radiological imaging, and a text-based hierarchy of structures. The viewer includes novel collaborative tools: users can save bookmarks of atlas views for later access and exchange those bookmarks with other users, and dynamic shared views allow groups of users can participate in a collaborative interactive atlas viewing session. We have published several anatomy atlases (an MRI-derived brain atlas and atlases of other parts of the anatomy) to demonstrate OABrowser's functionality. The atlas source data, processing tools, and the source for OABrowser are freely available through GitHub and are distributed under a liberal open source license. |
X Demographics
Geographical breakdown
Country | Count | As % |
---|---|---|
United States | 5 | 21% |
Germany | 2 | 8% |
Turkey | 1 | 4% |
Honduras | 1 | 4% |
Austria | 1 | 4% |
Japan | 1 | 4% |
Kazakhstan | 1 | 4% |
Switzerland | 1 | 4% |
United Kingdom | 1 | 4% |
Other | 4 | 17% |
Unknown | 6 | 25% |
Demographic breakdown
Type | Count | As % |
---|---|---|
Members of the public | 11 | 46% |
Scientists | 10 | 42% |
Science communicators (journalists, bloggers, editors) | 2 | 8% |
Practitioners (doctors, other healthcare professionals) | 1 | 4% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
---|---|---|
Unknown | 25 | 100% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Researcher | 9 | 36% |
Student > Master | 5 | 20% |
Other | 3 | 12% |
Student > Doctoral Student | 3 | 12% |
Student > Ph. D. Student | 2 | 8% |
Other | 1 | 4% |
Unknown | 2 | 8% |
Readers by discipline | Count | As % |
---|---|---|
Computer Science | 6 | 24% |
Neuroscience | 4 | 16% |
Agricultural and Biological Sciences | 3 | 12% |
Medicine and Dentistry | 3 | 12% |
Biochemistry, Genetics and Molecular Biology | 2 | 8% |
Other | 5 | 20% |
Unknown | 2 | 8% |