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Neuroproteomics

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Cover of 'Neuroproteomics'

Table of Contents

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    Book Overview
  2. Altmetric Badge
    Chapter 1 Neuroproteomics Studies: Challenges and Updates
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    Chapter 2 Progress and Potential of Imaging Mass Spectrometry Applied to Biomarker Discovery
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    Chapter 3 Biofluid Proteomics and Biomarkers in Traumatic Brain Injury
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    Chapter 4 Degradomics in Neurotrauma: Profiling Traumatic Brain Injury
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    Chapter 5 Evolving Relevance of Neuroproteomics in Alzheimer’s Disease
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    Chapter 6 Genome to Phenome: A Systems Biology Approach to PTSD Using an Animal Model
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    Chapter 7 Photoaffinity Labeling of Pentameric Ligand-Gated Ion Channels: A Proteomic Approach to Identify Allosteric Modulator Binding Sites
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    Chapter 8 Quantitative Phosphoproteomic Analysis of Brain Tissues
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    Chapter 9 Glycoproteins Enrichment and LC-MS/MS Glycoproteomics in Central Nervous System Applications
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    Chapter 10 A Novel 2-DE-Based Proteomic Analysis to Identify Multiple Substrates for Specific Protease in Neuronal Cells
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    Chapter 11 Neuroproteomic Profiling of Cerebrospinal Fluid (CSF) by Multiplexed Affinity Arrays
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    Chapter 12 Isolation and Proteomic Analysis of Microvesicles and Exosomes from HT22 Cells and Primary Neurons
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    Chapter 13 Combined MALDI Mass Spectrometry Imaging and Parafilm-Assisted Microdissection-Based LC-MS/MS Workflows in the Study of the Brain
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    Chapter 14 De Novo and Uninterrupted SILAC Labeling of Primary Microglia
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    Chapter 15 Spike-In SILAC Approach for Proteomic Analysis of Ex Vivo Microglia
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    Chapter 16 A Proteomic Evaluation of Sympathetic Activity Biomarkers of the Hypothalamus-Pituitary-Adrenal Axis by Western Blotting Technique Following Experimental Traumatic Brain Injury
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    Chapter 17 Efficient and Accurate Algorithm for Cleaved Fragments Prediction (CFPA) in Protein Sequences Dataset Based on Consensus and Its Variants: A Novel Degradomics Prediction Application
  19. Altmetric Badge
    Chapter 18 Effect of Second-Hand Tobacco Smoke on the Nitration of Brain Proteins: A Systems Biology and Bioinformatics Approach
  20. Altmetric Badge
    Chapter 19 An Advanced Omic Approach to Identify Co-Regulated Clusters and Transcription Regulation Network with AGCT and SHOE Methods
  21. Altmetric Badge
    Chapter 20 AutoDock and AutoDockTools for Protein-Ligand Docking: Beta-Site Amyloid Precursor Protein Cleaving Enzyme 1(BACE1) as a Case Study
  22. Altmetric Badge
    Chapter 21 An Integration of Decision Tree and Visual Analysis to Analyze Intracranial Pressure
Attention for Chapter 6: Genome to Phenome: A Systems Biology Approach to PTSD Using an Animal Model
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Chapter title
Genome to Phenome: A Systems Biology Approach to PTSD Using an Animal Model
Chapter number 6
Book title
Neuroproteomics
Published in
Methods in molecular biology, January 2017
DOI 10.1007/978-1-4939-6952-4_6
Pubmed ID
Book ISBNs
978-1-4939-6950-0, 978-1-4939-6952-4, 978-1-4939-6950-0, 978-1-4939-6952-4
Authors

Nabarun Chakraborty, James Meyerhoff, Marti Jett, Rasha Hammamieh, Rasha Hammamieh Ph.D., Chakraborty, Nabarun, Meyerhoff, James, Jett, Marti, Hammamieh, Rasha

Editors

Firas H. Kobeissy, Stanley M. Stevens, Jr.

Abstract

Post-traumatic stress disorder (PTSD) is a debilitating illness that imposes significant emotional and financial burdens on military families. The understanding of PTSD etiology remains elusive; nonetheless, it is clear that PTSD is manifested by a cluster of symptoms including hyperarousal, reexperiencing of traumatic events, and avoidance of trauma reminders. With these characteristics in mind, several rodent models have been developed eliciting PTSD-like features. Animal models with social dimensions are of particular interest, since the social context plays a major role in the development and manifestation of PTSD.For civilians, a core trauma that elicits PTSD might be characterized by a singular life-threatening event such as a car accident. In contrast, among war veterans, PTSD might be triggered by repeated threats and a cumulative psychological burden that coalesced in the combat zone. In capturing this fundamental difference, the aggressor-exposed social stress (Agg-E SS) model imposes highly threatening conspecific trauma on naïve mice repeatedly and randomly.There is abundant evidence that suggests the potential role of genetic contributions to risk factors for PTSD. Specific observations include putatively heritable attributes of the disorder, the cited cases of atypical brain morphology, and the observed neuroendocrine shifts away from normative. Taken together, these features underscore the importance of multi-omics investigations to develop a comprehensive picture. More daunting will be the task of downstream analysis with integration of these heterogeneous genotypic and phenotypic data types to deliver putative clinical biomarkers. Researchers are advocating for a systems biology approach, which has demonstrated an increasingly robust potential for integrating multidisciplinary data. By applying a systems biology approach here, we have connected the tissue-specific molecular perturbations to the behaviors displayed by mice subjected to Agg-E SS. A molecular pattern that links the atypical fear plasticity to energy deficiency was thereby identified to be causally associated with many behavioral shifts and transformations.PTSD is a multifactorial illness sensitive to environmental influence. Accordingly, it is essential to employ the optimal animal model approximating the environmental condition that elicits PTSD-like symptoms. Integration of an optimal animal model with a systems biology approach can contribute to a more knowledge-driven and efficient next-generation care management system and, potentially, prevention of PTSD.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 46 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 46 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 8 17%
Student > Ph. D. Student 6 13%
Student > Doctoral Student 3 7%
Student > Bachelor 3 7%
Student > Master 3 7%
Other 7 15%
Unknown 16 35%
Readers by discipline Count As %
Psychology 6 13%
Medicine and Dentistry 6 13%
Neuroscience 4 9%
Biochemistry, Genetics and Molecular Biology 3 7%
Agricultural and Biological Sciences 3 7%
Other 7 15%
Unknown 17 37%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 04 September 2021.
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#20,420,242
of 22,971,207 outputs
Outputs from Methods in molecular biology
#9,928
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Outputs of similar age
#356,026
of 421,092 outputs
Outputs of similar age from Methods in molecular biology
#842
of 1,074 outputs
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