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Comparison of Deep-Water Viromes from the Atlantic Ocean and the Mediterranean Sea

Overview of attention for article published in PLOS ONE, June 2014
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Title
Comparison of Deep-Water Viromes from the Atlantic Ocean and the Mediterranean Sea
Published in
PLOS ONE, June 2014
DOI 10.1371/journal.pone.0100600
Pubmed ID
Authors

Christian Winter, Juan A. L. Garcia, Markus G. Weinbauer, Michael S. DuBow, Gerhard J. Herndl

Abstract

The aim of this study was to compare the composition of two deep-sea viral communities obtained from the Romanche Fracture Zone in the Atlantic Ocean (collected at 5200 m depth) and the southwest Mediterranean Sea (from 2400 m depth) using a pyro-sequencing approach. The results are based on 18.7% and 6.9% of the sequences obtained from the Atlantic Ocean and the Mediterranean Sea, respectively, with hits to genomes in the non-redundant viral RefSeq database. The identifiable richness and relative abundance in both viromes were dominated by archaeal and bacterial viruses accounting for 92.3% of the relative abundance in the Atlantic Ocean and for 83.6% in the Mediterranean Sea. Despite characteristic differences in hydrographic features between the sampling sites in the Atlantic Ocean and the Mediterranean Sea, 440 virus genomes were found in both viromes. An additional 431 virus genomes were identified in the Atlantic Ocean and 75 virus genomes were only found in the Mediterranean Sea. The results indicate that the rather contrasting deep-sea environments of the Atlantic Ocean and the Mediterranean Sea share a common core set of virus types constituting the majority of both virus communities in terms of relative abundance (Atlantic Ocean: 81.4%; Mediterranean Sea: 88.7%).

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 85 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Brazil 2 2%
South Africa 1 1%
United States 1 1%
Unknown 81 95%

Demographic breakdown

Readers by professional status Count As %
Researcher 23 27%
Student > Ph. D. Student 15 18%
Student > Master 10 12%
Student > Bachelor 9 11%
Student > Doctoral Student 5 6%
Other 12 14%
Unknown 11 13%
Readers by discipline Count As %
Agricultural and Biological Sciences 39 46%
Biochemistry, Genetics and Molecular Biology 11 13%
Environmental Science 10 12%
Immunology and Microbiology 6 7%
Chemistry 3 4%
Other 3 4%
Unknown 13 15%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 25 June 2014.
All research outputs
#18,294,766
of 23,498,099 outputs
Outputs from PLOS ONE
#153,867
of 201,220 outputs
Outputs of similar age
#157,693
of 229,700 outputs
Outputs of similar age from PLOS ONE
#3,087
of 4,441 outputs
Altmetric has tracked 23,498,099 research outputs across all sources so far. This one is in the 19th percentile – i.e., 19% of other outputs scored the same or lower than it.
So far Altmetric has tracked 201,220 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 15.3. This one is in the 19th percentile – i.e., 19% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 229,700 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 27th percentile – i.e., 27% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 4,441 others from the same source and published within six weeks on either side of this one. This one is in the 26th percentile – i.e., 26% of its contemporaries scored the same or lower than it.