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Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics

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Table of Contents

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    Book Overview
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    Chapter 1 Classifying Phenotypes Based on the Community Structure of Human Brain Networks
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    Chapter 2 Autism Spectrum Disorder Diagnosis Using Sparse Graph Embedding of Morphological Brain Networks
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    Chapter 3 Topology of Surface Displacement Shape Feature in Subcortical Structures
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    Chapter 4 Graph Geodesics to Find Progressively Similar Skin Lesion Images
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    Chapter 5 Uncertainty Estimation in Vascular Networks
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    Chapter 6 Extraction of Airways with Probabilistic State-Space Models and Bayesian Smoothing
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    Chapter 7 Detection and Localization of Landmarks in the Lower Extremities Using an Automatically Learned Conditional Random Field
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    Chapter 8 Bridge Simulation and Metric Estimation on Landmark Manifolds
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    Chapter 9 White Matter Fiber Segmentation Using Functional Varifolds
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    Chapter 10 Prediction of the Progression of Subcortical Brain Structures in Alzheimer’s Disease from Baseline
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    Chapter 11 A New Metric for Statistical Analysis of Rigid Transformations: Application to the Rib Cage
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    Chapter 12 Unbiased Diffeomorphic Mapping of Longitudinal Data with Simultaneous Subject Specific Template Estimation
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    Chapter 13 Exact Function Alignment Under Elastic Riemannian Metric
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    Chapter 14 Varifold-Based Matching of Curves via Sobolev-Type Riemannian Metrics
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    Chapter 15 Computational Anatomy in Theano
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    Chapter 16 Rank Constrained Diffeomorphic Density Motion Estimation for Respiratory Correlated Computed Tomography
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    Chapter 17 Efficient Parallel Transport in the Group of Diffeomorphisms via Reduction to the Lie Algebra
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    Chapter 18 Multi-modal Image Classification Using Low-Dimensional Texture Features for Genomic Brain Tumor Recognition
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    Chapter 19 A Fast SCCA Algorithm for Big Data Analysis in Brain Imaging Genetics
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    Chapter 20 Transcriptome-Guided Imaging Genetic Analysis via a Novel Sparse CCA Algorithm
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    Chapter 21 Multilevel Modeling with Structured Penalties for Classification from Imaging Genetics Data
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    Chapter 22 Coupled Dimensionality-Reduction Model for Imaging Genomics
Attention for Chapter 17: Efficient Parallel Transport in the Group of Diffeomorphisms via Reduction to the Lie Algebra
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Chapter title
Efficient Parallel Transport in the Group of Diffeomorphisms via Reduction to the Lie Algebra
Chapter number 17
Book title
Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics
Published in
Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics : first International Workshop, GRAIL 2017, 6th International Workshop, MFCA 2017, and third International Workshop, MICGen 2017, held in conjunction with M..., September 2017
DOI 10.1007/978-3-319-67675-3_17
Pubmed ID
Book ISBNs
978-3-31-967674-6, 978-3-31-967675-3
Authors

Kristen M. Campbell, P. Thomas Fletcher

Abstract

This paper presents an efficient, numerically stable algorithm for parallel transport of tangent vectors in the group of diffeomorphisms. Previous approaches to parallel transport in large deformation diffeomorphic metric mapping (LDDMM) of images represent a momenta field, the dual of a tangent vector to the diffeomorphism group, as a scalar field times the image gradient. This "scalar momenta" constraint couples tangent vectors with the images being deformed and leads to computationally costly horizontal lifts in parallel transport. This paper uses the vector momenta formulation of LDDMM, which decouples the diffeomorphisms from the structures being transformed, e.g., images, point sets, etc. This decoupling leads to parallel transport expressed as a linear ODE in the Lie algebra. Solving this ODE directly is numerically stable and significantly faster than other LDDMM parallel transport methods. Results on 2D synthetic data and 3D brain MRI demonstrate that our algorithm is fast and conserves the inner products of the transported tangent vectors.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 2 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 2 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 2 100%
Readers by discipline Count As %
Computer Science 1 50%
Physics and Astronomy 1 50%