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Hepatitis B Virus Subgenotype A1: Evolutionary Relationships between Brazilian, African and Asian Isolates

Overview of attention for article published in PLOS ONE, August 2014
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  • Above-average Attention Score compared to outputs of the same age (54th percentile)
  • Above-average Attention Score compared to outputs of the same age and source (54th percentile)

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3 X users
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70 Mendeley
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Title
Hepatitis B Virus Subgenotype A1: Evolutionary Relationships between Brazilian, African and Asian Isolates
Published in
PLOS ONE, August 2014
DOI 10.1371/journal.pone.0105317
Pubmed ID
Authors

Bárbara V. Lago, Francisco C. Mello, Anna Kramvis, Christian Niel, Selma A. Gomes

Abstract

Brazil is a country of low hepatitis B virus (HBV) endemicity in which the genotype A of HBV (HBV/A) is the most prevalent. The complete nucleotide sequences of 26 HBV/A isolates, originating from eight Brazilian states, were determined. All were adw2. Twenty-three belonged to subgenotype A1 and three to A2. By phylogenetic analysis, it was shown that all the 23 HBV/A1 isolates clustered together with isolates from Bangladesh, India, Japan, Nepal, the Philippines and United Arab Emirates, but not with those of Congo, Kenya, Malawi, Rwanda, South Africa, Tanzania, Uganda and Zimbabwe. Four amino acid residues in the polymerase (His138 in the terminal protein domain, Pro18 and His90 in the spacer, and Ser109 in the reverse transcriptase), and one (Phe17) in the precore region, predominated in Latin American and Asian HBV/A1 isolates, but were rarely encountered in African isolates, with the exception of those from Somalia. Specific variations of two adjacent amino acids in the C-terminal domain of the HBx protein, namely Ala146 and Pro147, were found in all the Brazilian, but rarely in the other HBV/A1 isolates. By Bayesian analysis, the existence of an 'Asian-American' clade within subgenotype A1 was supported by a posterior probability value of 0.996. The close relatedness of the Brazilian, Asian and Somalian isolates suggests that the HBV/A1 strains predominant in Brazil did not originate from the five million slaves who were imported from Central and Western Africa from 1551 to 1840, but rather from the 300-400,000 captives forcibly removed from southeast Africa at the middle of the 19th century.

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X Demographics

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 70 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Kenya 1 1%
Argentina 1 1%
South Africa 1 1%
Unknown 67 96%

Demographic breakdown

Readers by professional status Count As %
Researcher 14 20%
Student > Master 13 19%
Student > Bachelor 7 10%
Student > Postgraduate 6 9%
Student > Doctoral Student 5 7%
Other 13 19%
Unknown 12 17%
Readers by discipline Count As %
Medicine and Dentistry 20 29%
Agricultural and Biological Sciences 15 21%
Immunology and Microbiology 4 6%
Biochemistry, Genetics and Molecular Biology 4 6%
Nursing and Health Professions 4 6%
Other 8 11%
Unknown 15 21%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 16 October 2014.
All research outputs
#12,841,494
of 22,760,687 outputs
Outputs from PLOS ONE
#100,043
of 194,199 outputs
Outputs of similar age
#103,438
of 231,195 outputs
Outputs of similar age from PLOS ONE
#2,138
of 4,726 outputs
Altmetric has tracked 22,760,687 research outputs across all sources so far. This one is in the 43rd percentile – i.e., 43% of other outputs scored the same or lower than it.
So far Altmetric has tracked 194,199 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 15.1. This one is in the 48th percentile – i.e., 48% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 231,195 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 54% of its contemporaries.
We're also able to compare this research output to 4,726 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 54% of its contemporaries.