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A new rhesus macaque assembly and annotation for next-generation sequencing analyses

Overview of attention for article published in Biology Direct, October 2014
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (91st percentile)
  • High Attention Score compared to outputs of the same age and source (99th percentile)

Mentioned by

blogs
1 blog
twitter
11 X users
patent
10 patents

Citations

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155 Dimensions

Readers on

mendeley
89 Mendeley
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Title
A new rhesus macaque assembly and annotation for next-generation sequencing analyses
Published in
Biology Direct, October 2014
DOI 10.1186/1745-6150-9-20
Pubmed ID
Authors

Aleksey V Zimin, Adam S Cornish, Mnirnal D Maudhoo, Robert M Gibbs, Xiongfei Zhang, Sanjit Pandey, Daniel T Meehan, Kristin Wipfler, Steven E Bosinger, Zachary P Johnson, Gregory K Tharp, Guillaume Marçais, Michael Roberts, Betsy Ferguson, Howard S Fox, Todd Treangen, Steven L Salzberg, James A Yorke, Robert B Norgren,

Abstract

The rhesus macaque (Macaca mulatta) is a key species for advancing biomedical research. Like all draft mammalian genomes, the draft rhesus assembly (rheMac2) has gaps, sequencing errors and misassemblies that have prevented automated annotation pipelines from functioning correctly. Another rhesus macaque assembly, CR_1.0, is also available but is substantially more fragmented than rheMac2 with smaller contigs and scaffolds. Annotations for these two assemblies are limited in completeness and accuracy. High quality assembly and annotation files are required for a wide range of studies including expression, genetic and evolutionary analyses.

X Demographics

X Demographics

The data shown below were collected from the profiles of 11 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 89 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 5 6%
Netherlands 1 1%
Sweden 1 1%
France 1 1%
Unknown 81 91%

Demographic breakdown

Readers by professional status Count As %
Researcher 23 26%
Student > Master 12 13%
Student > Bachelor 11 12%
Student > Ph. D. Student 11 12%
Student > Postgraduate 5 6%
Other 11 12%
Unknown 16 18%
Readers by discipline Count As %
Agricultural and Biological Sciences 25 28%
Biochemistry, Genetics and Molecular Biology 22 25%
Computer Science 6 7%
Medicine and Dentistry 5 6%
Immunology and Microbiology 3 3%
Other 9 10%
Unknown 19 21%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 19. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 14 November 2023.
All research outputs
#1,869,962
of 24,605,383 outputs
Outputs from Biology Direct
#63
of 523 outputs
Outputs of similar age
#21,110
of 261,110 outputs
Outputs of similar age from Biology Direct
#1
of 6 outputs
Altmetric has tracked 24,605,383 research outputs across all sources so far. Compared to these this one has done particularly well and is in the 92nd percentile: it's in the top 10% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 523 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 10.4. This one has done well, scoring higher than 88% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 261,110 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 91% of its contemporaries.
We're also able to compare this research output to 6 others from the same source and published within six weeks on either side of this one. This one has scored higher than all of them