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Quorum Sensing

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Cover of 'Quorum Sensing'

Table of Contents

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    Book Overview
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    Chapter 1 Use of Whole-Cell Bioassays for Screening Quorum Signaling, Quorum Interference, and Biofilm Dispersion
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    Chapter 2 Detection of 2-Alkyl-4-Quinolones Using Biosensors
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    Chapter 3 “Hot Stuff”: The Many Uses of a Radiolabel Assay in Detecting Acyl-Homoserine Lactone Quorum-Sensing Signals
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    Chapter 4 Liquid Chromatography/Mass Spectrometry (LC/MS) for the Detection and Quantification of N-Acyl-L-Homoserine Lactones (AHLs) and 4-Hydroxy-2-Alkylquinolines (HAQs)
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    Chapter 5 Detection of the Bacterial Quorum-Sensing Signaling Molecules N-Acyl-Homoserine Lactones (HSL) and N-Acyl-Homoserine (HS) with an Enzyme-Linked Immunosorbent Assay (ELISA) and via Ultrahigh-Performance Liquid Chromatography Coupled to Mass Spectrometry (UHPLC-MS)
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    Chapter 6 Biosensors for the Detection and Quantification of AI-2 Class Quorum-Sensing Compounds
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    Chapter 7 Detection of Agr-Type Autoinducing Peptides Produced by Staphylococcus aureus
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    Chapter 8 Ultra-Performance Liquid Chromatography/Mass Spectrometry for the Detection and Quantification of Diffusible Signal Factor (DSF) Family Quorum-Sensing Signals
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    Chapter 9 Rapid Electrochemical Detection of Pseudomonas aeruginosa Signaling Molecules by Boron-Doped Diamond Electrode
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    Chapter 10 Detection and Quantification of Butyrolactones from Streptomyces
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    Chapter 11 Fluorescence Quenching Studies of γ-Butyrolactone-Binding Protein (CprB) from Streptomyces coelicolor A3(2)
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    Chapter 12 Methods to Study Solo/Orphan Quorum-Sensing Receptors
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    Chapter 13 Enzymatic Assays to Investigate Acyl-Homoserine Lactone Autoinducer Synthases
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    Chapter 14 Global Expression Analysis of Quorum Sensing-Controlled Genes by RNAseq
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    Chapter 15 Identification of AHL- and BDSF-Controlled Proteins in Burkholderia cenocepacia by Proteomics
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    Chapter 16 Imaging N-Acyl Homoserine Lactone Quorum Sensing In Vivo
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    Chapter 17 Assessing Pseudomonas aeruginosa Autoinducer Effects on Mammalian Epithelial Cells
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    Chapter 18 Animal Models for Pseudomonas aeruginosa Quorum Sensing Studies
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    Chapter 19 Methods to Study Quorum Sensing-Dependent Virulence and Movement of Phytopathogens In Planta
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    Chapter 20 Differential Equations Models to Study Quorum Sensing
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    Chapter 21 Qualitative and Quantitative Determination of Quorum Sensing Inhibition In Vitro
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    Chapter 22 A Coculture-Based Approach for Screening Campaigns Aimed at Identifying Novel Pseudomonas aeruginosa Quorum Sensing Inhibitors
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    Chapter 23 A Culture-Dependent Method for the Identification of Quorum Quenching Enzymes of Microbial Origin
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    Chapter 24 Directed Evolution of Quorum-Quenching Enzymes: A Method for the Construction of a Directed Evolution Platform and Characterization of a Quorum-Quenching Lactonase from Geobacillus kaustophilus
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    Chapter 25 Generation of High-Sensitivity Monoclonal Antibodies Specific for Homoserine Lactones
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    Chapter 26 Identification of AI-2 Quorum Sensing Inhibitors in Vibrio harveyi Through Structure-Based Virtual Screening
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    Chapter 27 Identification of Staphylococcal Quorum Sensing Inhibitors by Quantification of õ-Hemolysin with High Performance Liquid Chromatography
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    Chapter 28 Erratum to: Fluorescence Quenching Studies of γ-Butyrolactone-Binding Protein (CprB) from Streptomyces coelicolor A3(2)
Attention for Chapter 20: Differential Equations Models to Study Quorum Sensing
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Chapter title
Differential Equations Models to Study Quorum Sensing
Chapter number 20
Book title
Quorum Sensing
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-7309-5_20
Pubmed ID
Book ISBNs
978-1-4939-7308-8, 978-1-4939-7309-5
Authors

Judith Pérez-Velázquez, Burkhard A. Hense

Abstract

Mathematical models to study quorum sensing (QS) have become an important tool to explore all aspects of this type of bacterial communication. A wide spectrum of mathematical tools and methods such as dynamical systems, stochastics, and spatial models can be employed. In this chapter, we focus on giving an overview of models consisting of differential equations (DE), which can be used to describe changing quantities, for example, the dynamics of one or more signaling molecule in time and space, often in conjunction with bacterial growth dynamics. The chapter is divided into two sections: ordinary differential equations (ODE) and partial differential equations (PDE) models of QS. Rates of change are represented mathematically by derivatives, i.e., in terms of DE. ODE models allow describing changes in one independent variable, for example, time. PDE models can be used to follow changes in more than one independent variable, for example, time and space. Both types of models often consist of systems (i.e., more than one equation) of equations, such as equations for bacterial growth and autoinducer concentration dynamics. Almost from the onset, mathematical modeling of QS using differential equations has been an interdisciplinary endeavor and many of the works we revised here will be placed into their biological context.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 11 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 11 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 4 36%
Student > Ph. D. Student 3 27%
Librarian 1 9%
Student > Master 1 9%
Unknown 2 18%
Readers by discipline Count As %
Agricultural and Biological Sciences 3 27%
Mathematics 1 9%
Computer Science 1 9%
Chemistry 1 9%
Engineering 1 9%
Other 0 0%
Unknown 4 36%