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Cereal Genomics

Overview of attention for book
Cover of 'Cereal Genomics'

Table of Contents

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    Book Overview
  2. Altmetric Badge
    Chapter 1 DNA extraction from vegetative tissue for next-generation sequencing.
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    Chapter 2 DNA extraction from rice endosperm (including a protocol for extraction of DNA from ancient seed samples).
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    Chapter 3 RNA Extraction from Cereal Vegetative Tissue
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    Chapter 4 RNA Extraction from Developing or Mature Wheat Seeds
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    Chapter 5 cDNA Library Preparation
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    Chapter 6 Preparation of High Molecular Weight gDNA and Bacterial Artificial Chromosome (BAC) Libraries in Plants
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    Chapter 7 The Polymerase Chain Reaction (PCR): General Methods
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    Chapter 8 Mutation and Mutation Screening
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    Chapter 9 The Quantitative Real-Time Polymerase Chain Reaction for the Analysis of Plant Gene Expression
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    Chapter 10 Cloning of DNA Fragments: Ligation Reactions in Agarose Gel
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    Chapter 11 Rapid Cloning of Genes and Promoters for Functional Analyses
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    Chapter 12 Genome Walking
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    Chapter 13 Functional Analysis by Protein Biochemistry
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    Chapter 14 Genomic Southern Blot Analysis
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    Chapter 15 Northern Hybridization: A Proficient Method for Detection of Small RNAs and MicroRNAs
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    Chapter 16 Protein Blotting Protocol for Beginners
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    Chapter 17 Genetic Transformation of Wheat via Particle Bombardment
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    Chapter 18 Sorghum Genetic Transformation by Particle Bombardment
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    Chapter 19 Genetic Transformation of Wheat via Agrobacterium-Mediated DNA Delivery.
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    Chapter 20 A Protocol for High-Throughput Agrobacterium-Mediated Barley Transformation
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    Chapter 21 Agrobacterium-Mediated Transformation: Rice Transformation
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    Chapter 22 Agrobacterium-Mediated Transformation of Maize (Zea mays) Immature Embryos
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    Chapter 23 A Technical Platform for PCR-Based SNP Screening in Cereals and Other Crops
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    Chapter 24 A Method for Discovery of Genome-Wide SNP Between Any Two Genotypes from Whole-Genome Re-sequencing Data
Attention for Chapter 1: DNA extraction from vegetative tissue for next-generation sequencing.
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Chapter title
DNA extraction from vegetative tissue for next-generation sequencing.
Chapter number 1
Book title
Cereal Genomics
Published in
Methods in molecular biology, January 2014
DOI 10.1007/978-1-62703-715-0_1
Pubmed ID
Book ISBNs
978-1-62703-714-3, 978-1-62703-715-0
Authors

Agnelo Furtado, Furtado, Agnelo

Abstract

The quality of extracted DNA is crucial for several applications in molecular biology. If the DNA is to be used for next-generation sequencing (NGS), then microgram quantities of good-quality DNA is required. In addition, the DNA must substantially be of high molecular weight so that it can be used for library preparation and NGS sequencing. Contaminating phenol or starch in the isolated DNA can be easily removed by filtration through kit-based cartridges. In this chapter we describe a simple two-reagent DNA extraction protocol which yields a high quality and quantity of DNA which can be used for different applications including NGS.

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X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 20 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 20 100%

Demographic breakdown

Readers by professional status Count As %
Student > Postgraduate 3 15%
Student > Bachelor 2 10%
Professor 2 10%
Student > Ph. D. Student 2 10%
Student > Master 2 10%
Other 3 15%
Unknown 6 30%
Readers by discipline Count As %
Agricultural and Biological Sciences 8 40%
Biochemistry, Genetics and Molecular Biology 2 10%
Environmental Science 1 5%
Computer Science 1 5%
Immunology and Microbiology 1 5%
Other 2 10%
Unknown 5 25%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 19 November 2013.
All research outputs
#18,354,532
of 22,731,677 outputs
Outputs from Methods in molecular biology
#7,855
of 13,086 outputs
Outputs of similar age
#229,301
of 305,170 outputs
Outputs of similar age from Methods in molecular biology
#293
of 594 outputs
Altmetric has tracked 22,731,677 research outputs across all sources so far. This one is in the 11th percentile – i.e., 11% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,086 research outputs from this source. They receive a mean Attention Score of 3.3. This one is in the 24th percentile – i.e., 24% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 305,170 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 13th percentile – i.e., 13% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 594 others from the same source and published within six weeks on either side of this one. This one is in the 32nd percentile – i.e., 32% of its contemporaries scored the same or lower than it.