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Single nucleotide polymorphisms in asthma candidate genes TBXA2R, ADAM33 FCER1B and ORMDL3 in Pakistani asthmatics a case control study

Overview of attention for article published in Asthma Research and Practice, March 2018
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Title
Single nucleotide polymorphisms in asthma candidate genes TBXA2R, ADAM33 FCER1B and ORMDL3 in Pakistani asthmatics a case control study
Published in
Asthma Research and Practice, March 2018
DOI 10.1186/s40733-018-0039-4
Pubmed ID
Authors

Nusrat Saba, Osman Yusuf, Sadia Rehman, Saeeda Munir, Amna Noor, Muhammad Saqlain, Atika Mansoor, Ghazala Kaukab Raja

Abstract

Genetic variations in different loci and genes are important in asthma pathogenesis. There is much importance of various immunological pathways in the IgE secretion regulation. Alterations in any main part of these pathways can increase the risk of asthma development. Polymorphisms in these genetic markers can effect certain pathways which predict the asthma susceptibility. In the present study, SNPs directly or indirectly affecting the immunological process pathways are selected. This study was conducted to determine association of 16 SNPs in 10 candidate genes with asthma in Pakistani population in 333 asthmatic cases and 220 healthy controls. Genotyping was performed using the Sequenom Mass ARRAY iPLEX platform (14 SNPs) and TaqMan assay (2 SNPs). The minor allele at two of the SNPs showed association with protection from asthma, rs1131882 inTBXA2Rgene (OR 0.73, 95% CI 0.52-1.01,P = 0.05) and rs2280091 in theADAM33gene (OR 0.69, 95% CI 0.50-0.97,P = 0.03). ForFCER1Bgene, rs2583476 the asthmatic male gender had higher TT genotype counts as compared to controls (OR = 1.86, 95% CI = 1.09-3.17,p = 0.01). In rs11650680 ofORMDL3gene the CT genotype is more prevalent in female asthma cases in comparison with female controls (OR = 1.99, 95% CI = 1.02-3.89,p = 0.03). This data suggests that variations atTBXA2RandADAM33genes are found to be associated with asthma susceptibility in Pakistan.FCER1Bgene is associated with male andORMDL3in female asthmatics. These genetic markers can be important source of asthma risk in Pakistani population.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 19 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 19 100%

Demographic breakdown

Readers by professional status Count As %
Student > Bachelor 5 26%
Student > Master 3 16%
Other 2 11%
Student > Ph. D. Student 2 11%
Lecturer 1 5%
Other 2 11%
Unknown 4 21%
Readers by discipline Count As %
Agricultural and Biological Sciences 4 21%
Biochemistry, Genetics and Molecular Biology 3 16%
Medicine and Dentistry 2 11%
Computer Science 2 11%
Pharmacology, Toxicology and Pharmaceutical Science 1 5%
Other 2 11%
Unknown 5 26%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 29 March 2018.
All research outputs
#18,591,506
of 23,028,364 outputs
Outputs from Asthma Research and Practice
#77
of 82 outputs
Outputs of similar age
#258,245
of 332,500 outputs
Outputs of similar age from Asthma Research and Practice
#4
of 4 outputs
Altmetric has tracked 23,028,364 research outputs across all sources so far. This one is in the 11th percentile – i.e., 11% of other outputs scored the same or lower than it.
So far Altmetric has tracked 82 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 7.4. This one is in the 3rd percentile – i.e., 3% of its peers scored the same or lower than it.
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