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Plant Virology Protocols

Overview of attention for book
Cover of 'Plant Virology Protocols'

Table of Contents

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    Book Overview
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    Chapter 1 Detection of Plant Viruses in Mixed Infection by a Macroarray-Assisted Method
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    Chapter 2 Rt-PCR and real-time rt-PCR methods for the detection of potato virus y in potato leaves and tubers.
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    Chapter 3 A New Method to Isolate Total dsRNA
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    Chapter 4 Multiplex RT-PCR Method for the Simultaneous Detection of Nine Grapevine Viruses
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    Chapter 5 Detection Methods for Rice Viruses by a Reverse-Transcription Loop-Mediated Isothermal Amplification (RT-LAMP).
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    Chapter 6 Real-Time PCR Protocols for the Quantification of the Begomovirus Tomato Yellow Leaf Curl Sardinia Virus in Tomato Plants and in Its Insect Vector
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    Chapter 7 Detection and Analysis of Non-retroviral RNA Virus-Like Elements in Plant, Fungal, and Insect Genomes.
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    Chapter 8 Detection of Plant Viruses in Natural Environments by Using RNA-Seq
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    Chapter 9 Cloning and Profiling of Small RNAs from Cucumber Mosaic Virus Satellite RNA
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    Chapter 10 Drawing siRNAs of Viral Origin Out from Plant siRNAs Libraries.
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    Chapter 11 Viral detection by high-throughput sequencing.
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    Chapter 12 Plant Virology Protocols
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    Chapter 13 Detection and characterization of mycoviruses in arbuscular mycorrhizal fungi by deep-sequencing.
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    Chapter 14 SuperSAGE as an Analytical Tool for Host and Viral Gene Expression.
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    Chapter 15 Microarray Analysis of R -Gene-Mediated Resistance to Viruses
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    Chapter 16 Construction of Infectious cDNA Clones Derived from the Potyviruses Clover Yellow Vein Virus and Bean Yellow Mosaic Virus
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    Chapter 17 Virus-Induced Gene Silencing of N Gene in Tobacco by Apple Latent Spherical Virus Vectors
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    Chapter 18 Simplified Methods for the Construction of RNA and DNA Virus Infectious Clones
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    Chapter 19 Efficient double-stranded RNA production methods for utilization in plant virus control.
  21. Altmetric Badge
    Chapter 20 Detection of plant virus in meristem by immunohistochemistry and in situ hybridization.
Attention for Chapter 5: Detection Methods for Rice Viruses by a Reverse-Transcription Loop-Mediated Isothermal Amplification (RT-LAMP).
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Chapter title
Detection Methods for Rice Viruses by a Reverse-Transcription Loop-Mediated Isothermal Amplification (RT-LAMP).
Chapter number 5
Book title
Plant Virology Protocols
Published in
Methods in molecular biology, October 2014
DOI 10.1007/978-1-4939-1743-3_5
Pubmed ID
Book ISBNs
978-1-4939-1742-6, 978-1-4939-1743-3
Authors

Sasaya T, Takahide Sasaya, Sasaya, Takahide

Abstract

Developing a quick and accurate method to diagnose rice viruses in host plants and in vector insects is very important to control virus diseases of rice. A reverse-transcription loop-mediated isothermal amplification (RT-LAMP) assay, one of the most promising molecular diagnostic methods, was established to detect nine viruses, including eight RNA viruses and one DNA virus, in infected rice plants and the viruliferous vector insects. The sensitivities of the assays were either higher than or similar to those of one-step RT-PCR. With a combination of rapid RNA extraction and a RT-LAMP assay, these nine viruses were detected within 2 h from infected rice plants and the viruliferous insects without expensive or unusual equipment. This RT-LAMP method for rice viruses can therefore be adopted not only for diagnosis but also to study the epidemiology and molecular pathology of rice viruses.

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X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 11 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 11 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 4 36%
Researcher 2 18%
Student > Bachelor 1 9%
Lecturer 1 9%
Student > Master 1 9%
Other 1 9%
Unknown 1 9%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 5 45%
Agricultural and Biological Sciences 4 36%
Immunology and Microbiology 1 9%
Unknown 1 9%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 13 October 2014.
All research outputs
#14,787,304
of 22,766,595 outputs
Outputs from Methods in molecular biology
#4,676
of 13,090 outputs
Outputs of similar age
#140,803
of 255,208 outputs
Outputs of similar age from Methods in molecular biology
#33
of 131 outputs
Altmetric has tracked 22,766,595 research outputs across all sources so far. This one is in the 32nd percentile – i.e., 32% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,090 research outputs from this source. They receive a mean Attention Score of 3.3. This one has gotten more attention than average, scoring higher than 59% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 255,208 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 42nd percentile – i.e., 42% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 131 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 70% of its contemporaries.