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Draft genome sequence of Paraburkholderia tropica Ppe8 strain, a sugarcane endophytic diazotrophic bacterium

Overview of attention for article published in Brazilian Journal of Microbiology, April 2018
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1 tweeter

Citations

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14 Dimensions

Readers on

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31 Mendeley
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Title
Draft genome sequence of Paraburkholderia tropica Ppe8 strain, a sugarcane endophytic diazotrophic bacterium
Published in
Brazilian Journal of Microbiology, April 2018
DOI 10.1016/j.bjm.2017.07.005
Pubmed ID
29122479
Authors

Paula Renata Alves da Silva, Jean Luiz Simões-Araújo, Márcia Soares Vidal, Leonardo Magalhães Cruz, Emanuel Maltempi de Souza, José Ivo Baldani

Abstract

Paraburkholderia tropica (syn Burkholderia tropica) are nitrogen-fixing bacteria commonly found in sugarcane. The Paraburkholderia tropica strain Ppe8 is part of the sugarcane inoculant consortium that has a beneficial effect on yield. Here, we report a draft genome sequence of this strain elucidating the mechanisms involved in its interaction mainly with Poaceae. A genome size of approximately 8.75Mb containing 7844 protein coding genes distributed in 526 subsystems was de novo assembled with ABySS and annotated by RAST. Genes related to the nitrogen fixation process, the secretion systems (I, II, III, IV, and VI), and related to a variety of metabolic traits, such as metabolism of carbohydrates, amino acids, vitamins, and proteins, were detected, suggesting a broad metabolic capacity and possible adaptation to plant association.

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Twitter Demographics

The data shown below were collected from the profile of 1 tweeter who shared this research output. Click here to find out more about how the information was compiled.

Mendeley readers

The data shown below were compiled from readership statistics for 31 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 31 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 5 16%
Researcher 4 13%
Lecturer 2 6%
Student > Doctoral Student 2 6%
Other 2 6%
Other 5 16%
Unknown 11 35%
Readers by discipline Count As %
Agricultural and Biological Sciences 10 32%
Environmental Science 4 13%
Computer Science 1 3%
Immunology and Microbiology 1 3%
Chemistry 1 3%
Other 1 3%
Unknown 13 42%

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 25 August 2018.
All research outputs
#18,647,094
of 23,100,534 outputs
Outputs from Brazilian Journal of Microbiology
#719
of 1,134 outputs
Outputs of similar age
#256,763
of 330,365 outputs
Outputs of similar age from Brazilian Journal of Microbiology
#10
of 17 outputs
Altmetric has tracked 23,100,534 research outputs across all sources so far. This one is in the 11th percentile – i.e., 11% of other outputs scored the same or lower than it.
So far Altmetric has tracked 1,134 research outputs from this source. They receive a mean Attention Score of 2.5. This one is in the 25th percentile – i.e., 25% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 330,365 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 11th percentile – i.e., 11% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 17 others from the same source and published within six weeks on either side of this one. This one is in the 23rd percentile – i.e., 23% of its contemporaries scored the same or lower than it.

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