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Protein Structure Prediction

Overview of attention for book
Cover of 'Protein Structure Prediction'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Structural Modeling and Ligand-Binding Prediction for Analysis of Structure-Unknown and Function-Unknown Proteins Using FORTE Alignment and PoSSuM Pocket Search
  3. Altmetric Badge
    Chapter 2 The MULTICOM Protein Structure Prediction Server Empowered by Deep Learning and Contact Distance Prediction
  4. Altmetric Badge
    Chapter 3 The Genome3D Consortium for Structural Annotations of Selected Model Organisms
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    Chapter 4 Estimating the Quality of 3D Protein Models Using the ModFOLD7 Server
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    Chapter 5 Prediction of Intrinsic Disorder with Quality Assessment Using QUARTER
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    Chapter 6 Modeling of Three-Dimensional RNA Structures Using SimRNA
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    Chapter 7 Modeling Protein Homo-Oligomer Structures with GalaxyHomomer Web Server
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    Chapter 8 Template-Based Modeling of Protein Complexes Using the PPI3D Web Server
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    Chapter 9 Protein–Protein and Protein–Peptide Docking with ClusPro Server
  11. Altmetric Badge
    Chapter 10 Modeling of Protein Complexes and Molecular Assemblies with pyDock
  12. Altmetric Badge
    Chapter 11 A Guide for Protein–Protein Docking Using SwarmDock
  13. Altmetric Badge
    Chapter 12 Modeling Protein–Protein or Protein–DNA/RNA Complexes Using the HDOCK Webserver
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    Chapter 13 IDP-LZerD: Software for Modeling Disordered Protein Interactions
  15. Altmetric Badge
    Chapter 14 AnAnaS: Software for Analytical Analysis of Symmetries in Protein Structures
  16. Altmetric Badge
    Chapter 15 MDockPeP: A Web Server for Blind Prediction of Protein–Peptide Complex Structures
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    Chapter 16 Protocols for All-Atom Reconstruction and High-Resolution Refinement of Protein–Peptide Complex Structures
  18. Altmetric Badge
    Chapter 17 Dockground Tool for Development and Benchmarking of Protein Docking Procedures
  19. Altmetric Badge
    Chapter 18 Molecular Dynamics Flexible Fitting: All You Want to Know About Resolution Exchange
  20. Altmetric Badge
    Chapter 19 Protein Structure Modeling from Cryo-EM Map Using MAINMAST and MAINMAST-GUI Plugin
  21. Altmetric Badge
    Chapter 20 Protocols for Fast Simulations of Protein Structure Flexibility Using CABS-Flex and SURPASS
Attention for Chapter 18: Molecular Dynamics Flexible Fitting: All You Want to Know About Resolution Exchange
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • Good Attention Score compared to outputs of the same age (69th percentile)
  • High Attention Score compared to outputs of the same age and source (93rd percentile)

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8 X users

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Chapter title
Molecular Dynamics Flexible Fitting: All You Want to Know About Resolution Exchange
Chapter number 18
Book title
Protein Structure Prediction
Published in
Methods in molecular biology, July 2020
DOI 10.1007/978-1-0716-0708-4_18
Pubmed ID
Book ISBNs
978-1-07-160707-7, 978-1-07-160708-4
Authors

John W. Vant, Daipayan Sarkar, Chitrak Gupta, Mrinal S. Shekhar, Sumit Mittal, Abhishek Singharoy, Vant, John W., Sarkar, Daipayan, Gupta, Chitrak, Shekhar, Mrinal S., Mittal, Sumit, Singharoy, Abhishek

X Demographics

X Demographics

The data shown below were collected from the profiles of 8 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 7 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 7 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 2 29%
Student > Doctoral Student 2 29%
Other 1 14%
Student > Ph. D. Student 1 14%
Unknown 1 14%
Readers by discipline Count As %
Medicine and Dentistry 3 43%
Chemistry 2 29%
Engineering 1 14%
Unknown 1 14%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 6. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 11 July 2020.
All research outputs
#5,725,277
of 23,577,761 outputs
Outputs from Methods in molecular biology
#1,580
of 13,423 outputs
Outputs of similar age
#121,162
of 399,129 outputs
Outputs of similar age from Methods in molecular biology
#10
of 146 outputs
Altmetric has tracked 23,577,761 research outputs across all sources so far. Compared to these this one has done well and is in the 75th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 13,423 research outputs from this source. They receive a mean Attention Score of 3.4. This one has done well, scoring higher than 88% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 399,129 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 69% of its contemporaries.
We're also able to compare this research output to 146 others from the same source and published within six weeks on either side of this one. This one has done particularly well, scoring higher than 93% of its contemporaries.