Title |
A transcription factor–based mechanism for mouse heterochromatin formation
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Published in |
Nature Structural & Molecular Biology, September 2012
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DOI | 10.1038/nsmb.2382 |
Pubmed ID | |
Authors |
Aydan Bulut-Karslioglu, Valentina Perrera, Manuela Scaranaro, Inti Alberto de la Rosa-Velazquez, Suzanne van de Nobelen, Nicholas Shukeir, Johannes Popow, Borbala Gerle, Susanne Opravil, Michaela Pagani, Simone Meidhof, Thomas Brabletz, Thomas Manke, Monika Lachner, Thomas Jenuwein |
Abstract |
Heterochromatin is important for genome integrity and stabilization of gene-expression programs. We have identified the transcription factors Pax3 and Pax9 as redundant regulators of mouse heterochromatin, as they repress RNA output from major satellite repeats by associating with DNA within pericentric heterochromatin. Simultaneous depletion of Pax3 and Pax9 resulted in dramatic derepression of major satellite transcripts, persistent impairment of heterochromatic marks and defects in chromosome segregation. Genome-wide analyses of methylated histone H3 at Lys9 showed enrichment at intergenic major satellite repeats only when these sequences retained intact binding sites for Pax and other transcription factors. Additionally, bioinformatic interrogation of all histone methyltransferase Suv39h-dependent heterochromatic repeat regions in the mouse genome revealed a high concordance with the presence of transcription factor binding sites. These data define a general model in which reiterated arrangement of transcription factor binding sites within repeat sequences is an intrinsic mechanism of the formation of heterochromatin. |
X Demographics
Geographical breakdown
Country | Count | As % |
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United States | 2 | 50% |
Canada | 1 | 25% |
Germany | 1 | 25% |
Demographic breakdown
Type | Count | As % |
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Members of the public | 2 | 50% |
Science communicators (journalists, bloggers, editors) | 1 | 25% |
Scientists | 1 | 25% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
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United Kingdom | 5 | 2% |
Russia | 2 | <1% |
United States | 2 | <1% |
Spain | 2 | <1% |
Brazil | 2 | <1% |
France | 1 | <1% |
Italy | 1 | <1% |
Czechia | 1 | <1% |
Canada | 1 | <1% |
Other | 5 | 2% |
Unknown | 311 | 93% |
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Readers by professional status | Count | As % |
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Student > Ph. D. Student | 97 | 29% |
Researcher | 80 | 24% |
Student > Master | 30 | 9% |
Student > Bachelor | 28 | 8% |
Professor > Associate Professor | 19 | 6% |
Other | 42 | 13% |
Unknown | 37 | 11% |
Readers by discipline | Count | As % |
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Biochemistry, Genetics and Molecular Biology | 89 | 27% |
Medicine and Dentistry | 11 | 3% |
Immunology and Microbiology | 3 | <1% |
Computer Science | 2 | <1% |
Other | 11 | 3% |
Unknown | 36 | 11% |