Ubiquitin Family Modifiers and the Proteasome

Table of Contents

1. Altmetric Badge
   Book Overview
2. Altmetric Badge
   Chapter 1 Three decades of studies to understand the functions of the ubiquitin family.
3. Altmetric Badge
   Chapter 2 Structure and evolution of ubiquitin and ubiquitin-related domains.
4. Altmetric Badge
   Chapter 3 Deciphering tissue-specific ubiquitylation by mass spectrometry.
5. Altmetric Badge
   Chapter 4 Analysis of Cellular SUMO and SUMO-Ubiquitin Hybrid Conjugates.
6. Altmetric Badge
   Chapter 5 Recombinant reconstitution of sumoylation reactions in vitro.
7. Altmetric Badge
   Chapter 6 Reconstitution of SUMO-Dependent Ubiquitylation In Vitro.
8. Altmetric Badge
   Chapter 7 Detection and Analysis of FAT10 Modification.
9. Altmetric Badge
   Chapter 8 Isolation of NEDDylated Proteins in Human Cells.
10. Altmetric Badge
    Chapter 9 The ISG15 Conjugation System.
11. Altmetric Badge
    Chapter 10 Pupylation: proteasomal targeting by a protein modifier in bacteria.
12. Altmetric Badge
    Chapter 11 Role of UbL Family Modifiers and Their Binding Proteins in Cell Signaling.
13. Altmetric Badge
    Chapter 12 Ubiquitin Family Modifiers and the Proteasome
14. Altmetric Badge
    Chapter 13 Using linkage-specific monoclonal antibodies to analyze cellular ubiquitylation.
15. Altmetric Badge
    Chapter 14 Measuring rates of ubiquitin chain formation as a functional readout of ligase activity.
16. Altmetric Badge
    Chapter 15 Synthesis and analysis of k11-linked ubiquitin chains.
17. Altmetric Badge
    Chapter 16 Synthesis and analysis of linear ubiquitin chains.
18. Altmetric Badge
    Chapter 17 Detection and Quantitation of SUMO Chains by Mass Spectrometry
19. Altmetric Badge
    Chapter 18 Bioinformatical Detection of Recognition Factors for Ubiquitin and SUMO.
20. Altmetric Badge
    Chapter 19 Surface Plasmon Resonance to Measure Interactions of UbFs with Their Binding Partners.
21. Altmetric Badge
    Chapter 20 Identifying and studying ubiquitin receptors by NMR.
22. Altmetric Badge
    Chapter 21 Exploring the Role of p97 and Its UBX-Domain Cofactors Through Identification of Their Interacting Proteins.
23. Altmetric Badge
    Chapter 22 Assembly and function of the proteasome.
24. Altmetric Badge
    Chapter 23 Using Native Gel Electrophoresis and Phosphofluoroimaging to Analyze GFP-Tagged Proteasomes.
25. Altmetric Badge
    Chapter 24 Disulfide engineering to map subunit interactions in the proteasome and other macromolecular complexes.
26. Altmetric Badge
    Chapter 25 Using DNA damage sensitivity phenotypes to characterize mutations affecting proteasome function.
27. Altmetric Badge
    Chapter 26 Analysing properties of proteasome inhibitors using kinetic and x-ray crystallographic studies.
28. Altmetric Badge
    Chapter 27 Immunoproteasome-specific inhibitors and their application.
29. Altmetric Badge
    Chapter 28 Binding of ubiquitin conjugates to proteasomes as visualized with native gels.
30. Altmetric Badge
    Chapter 29 Affinity Purification of Mammalian 26S Proteasomes Using an Ubiquitin-Like Domain.
31. Altmetric Badge
    Chapter 30 Using siRNA Techniques to Dissect Proteasome Assembly Pathways in Mammalian Cells.
32. Altmetric Badge
    Chapter 31 Reconstitution of PA700, the 19S Regulatory Particle, from Purified Precursor Complexes.
33. Altmetric Badge
    Chapter 32 Cellular responses to misfolded proteins and protein aggregates.
34. Altmetric Badge
    Chapter 33 Live-cell imaging of ubiquitin-proteasome system function.
35. Altmetric Badge
    Chapter 34 Analysis of chaperone-assisted ubiquitylation.
36. Altmetric Badge
    Chapter 35 Use of CPY* and Its Derivatives to Study Protein Quality Control in Various Cell Compartments.
37. Altmetric Badge
    Chapter 36 Assays to Measure ER-Associated Degradation in Yeast.
38. Altmetric Badge
    Chapter 37 SDS-PAGE Techniques to Study Ubiquitin-Like Conjugation Systems in Yeast Autophagy.
39. Altmetric Badge
    Chapter 38 Analysis of Ubiquitin-Dependent Proteolysis in Caenorhabditis elegans.
40. Altmetric Badge
    Chapter 39 Structural insights into functional modes of proteins involved in ubiquitin family pathways.
41. Altmetric Badge
    Chapter 40 Ubiquitin Family Modifiers and the Proteasome
42. Altmetric Badge
    Chapter 41 Ubiquitin Family Modifiers and the Proteasome
43. Altmetric Badge
    Chapter 42 Synthesis of atypical diubiquitin chains.
44. Altmetric Badge
    Chapter 43 TIPI: TEV Protease-Mediated Induction of Protein Instability.
45. Altmetric Badge
    Chapter 44 PROTAC-Induced Proteolytic Targeting
46. Altmetric Badge
    Chapter 45 Formation of nondegradable forked ubiquitin conjugates by ring-finger ligases and its prevention by s5a.
47. Altmetric Badge
    Chapter 46 S5a/Rpn10, a UIM-Protein, as a Universal Substrate for Ubiquitination.