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Environmental Microbiology

Overview of attention for book
Cover of 'Environmental Microbiology'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Environmental Microbiology
  3. Altmetric Badge
    Chapter 2 Rapid Extraction of PCR-Competent DNA from Recalcitrant Environmental Samples
  4. Altmetric Badge
    Chapter 3 Quantitative PCR for Detection of mRNA and gDNA in Environmental Isolates.
  5. Altmetric Badge
    Chapter 4 Analysis of Community Dynamics in Environmental Samples Using Denaturing Gradient Gel Electrophoresis
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    Chapter 5 Terminal Restriction Fragment Length Polymorphism (T-RFLP) Profiling of Bacterial 16S rRNA Genes
  7. Altmetric Badge
    Chapter 6 Environmental Microbiology
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    Chapter 7 Human Fecal Source Identification with Real-Time Quantitative PCR
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    Chapter 8 Next Generation Barcode Tagged Sequencing for Monitoring Microbial Community Dynamics
  10. Altmetric Badge
    Chapter 9 Analysis of Methanotroph Community Structure Using a pmoA-Based Microarray.
  11. Altmetric Badge
    Chapter 10 Biolog Phenotype MicroArrays for Phenotypic Characterization of Microbial Cells.
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    Chapter 11 Visualization of Metabolic Properties of Bacterial Cells Using Nanoscale Secondary Ion Mass Spectrometry (NanoSIMS)
  13. Altmetric Badge
    Chapter 12 Environmental Microbiology
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    Chapter 13 Environmental Microbiology
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    Chapter 14 Stable Isotope Probing to Study Functional Components of Complex Microbial Ecosystems
  16. Altmetric Badge
    Chapter 15 Metagenomics Using Next-Generation Sequencing
  17. Altmetric Badge
    Chapter 16 Targeted Genomics of Flow Cytometrically Sorted Cultured and Uncultured Microbial Groups
  18. Altmetric Badge
    Chapter 17 Quantitative microbial metatranscriptomics.
  19. Altmetric Badge
    Chapter 18 Quantitative metaproteomics: functional insights into microbial communities.
Attention for Chapter 17: Quantitative microbial metatranscriptomics.
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About this Attention Score

  • Good Attention Score compared to outputs of the same age (78th percentile)
  • High Attention Score compared to outputs of the same age and source (88th percentile)

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Citations

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Chapter title
Quantitative microbial metatranscriptomics.
Chapter number 17
Book title
Environmental Microbiology
Published in
Methods in molecular biology, January 2014
DOI 10.1007/978-1-62703-712-9_17
Pubmed ID
Book ISBNs
978-1-62703-711-2, 978-1-62703-712-9
Authors

Scott Gifford, Brandon Satinsky, Mary Ann Moran, Gifford, Scott, Satinsky, Brandon, Moran, Mary Ann

Abstract

The direct retrieval and sequencing of environmental RNA is emerging as a powerful technique to elucidate the in situ activities of microbial communities. Here we provide a metatranscriptomic protocol describing environmental sample collection, rRNA depletion, mRNA amplification, cDNA synthesis, and bioinformatic analysis. In addition, the preparation of internal RNA standards and their addition to the sample are discussed, providing a method by which transcript numbers can be expressed as absolute abundances in the environment and more readily compared to other biogeochemical and ecological measurements.

X Demographics

X Demographics

The data shown below were collected from the profiles of 10 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 43 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 2 5%
Unknown 41 95%

Demographic breakdown

Readers by professional status Count As %
Researcher 15 35%
Student > Ph. D. Student 8 19%
Student > Master 5 12%
Professor > Associate Professor 3 7%
Other 2 5%
Other 5 12%
Unknown 5 12%
Readers by discipline Count As %
Agricultural and Biological Sciences 19 44%
Biochemistry, Genetics and Molecular Biology 5 12%
Immunology and Microbiology 4 9%
Environmental Science 3 7%
Engineering 2 5%
Other 3 7%
Unknown 7 16%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 6. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 10 November 2020.
All research outputs
#5,929,026
of 23,498,099 outputs
Outputs from Methods in molecular biology
#1,676
of 13,368 outputs
Outputs of similar age
#67,541
of 308,917 outputs
Outputs of similar age from Methods in molecular biology
#68
of 587 outputs
Altmetric has tracked 23,498,099 research outputs across all sources so far. This one has received more attention than most of these and is in the 74th percentile.
So far Altmetric has tracked 13,368 research outputs from this source. They receive a mean Attention Score of 3.4. This one has done well, scoring higher than 87% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 308,917 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 78% of its contemporaries.
We're also able to compare this research output to 587 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 88% of its contemporaries.