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Environmental Microbiology

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Cover of 'Environmental Microbiology'

Table of Contents

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    Book Overview
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    Chapter 1 Environmental Microbiology
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    Chapter 2 Rapid Extraction of PCR-Competent DNA from Recalcitrant Environmental Samples
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    Chapter 3 Quantitative PCR for Detection of mRNA and gDNA in Environmental Isolates.
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    Chapter 4 Analysis of Community Dynamics in Environmental Samples Using Denaturing Gradient Gel Electrophoresis
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    Chapter 5 Terminal Restriction Fragment Length Polymorphism (T-RFLP) Profiling of Bacterial 16S rRNA Genes
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    Chapter 6 Environmental Microbiology
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    Chapter 7 Human Fecal Source Identification with Real-Time Quantitative PCR
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    Chapter 8 Next Generation Barcode Tagged Sequencing for Monitoring Microbial Community Dynamics
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    Chapter 9 Analysis of Methanotroph Community Structure Using a pmoA-Based Microarray.
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    Chapter 10 Biolog Phenotype MicroArrays for Phenotypic Characterization of Microbial Cells.
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    Chapter 11 Visualization of Metabolic Properties of Bacterial Cells Using Nanoscale Secondary Ion Mass Spectrometry (NanoSIMS)
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    Chapter 12 Environmental Microbiology
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    Chapter 13 Environmental Microbiology
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    Chapter 14 Stable Isotope Probing to Study Functional Components of Complex Microbial Ecosystems
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    Chapter 15 Metagenomics Using Next-Generation Sequencing
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    Chapter 16 Targeted Genomics of Flow Cytometrically Sorted Cultured and Uncultured Microbial Groups
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    Chapter 17 Quantitative microbial metatranscriptomics.
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    Chapter 18 Quantitative metaproteomics: functional insights into microbial communities.
Attention for Chapter 3: Quantitative PCR for Detection of mRNA and gDNA in Environmental Isolates.
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Chapter title
Quantitative PCR for Detection of mRNA and gDNA in Environmental Isolates.
Chapter number 3
Book title
Environmental Microbiology
Published in
Methods in molecular biology, January 2014
DOI 10.1007/978-1-62703-712-9_3
Pubmed ID
Book ISBNs
978-1-62703-711-2, 978-1-62703-712-9
Authors

Brzoska AJ, Hassan KA, Brzoska, Anthony J, Hassan, Karl A, Anthony J. Brzoska, Karl A. Hassan, Brzoska, Anthony J., Hassan, Karl A.

Editors

Ian T. Paulsen, Andrew J. Holmes

Abstract

Quantitative PCR is used to gauge the abundance of specific nucleic acid species within purified samples. Due to its high sensitivity and minimal operation costs, this method is routinely applied in modern molecular bioscience laboratories. Nonetheless, all quantitative PCR experiments must include several carefully designed, yet simple, controls to ensure the reliability of the analyses. The aim of this chapter is to provide basic quantitative PCR methods, from primer design through data analysis, that are generally applicable to studies in microbiology. These methods allow the abundance of targeted RNA or DNA molecules to be determined in nucleic acid samples purified from a variety of biological sources.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 7 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 7 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 3 43%
Student > Ph. D. Student 2 29%
Student > Master 1 14%
Unknown 1 14%
Readers by discipline Count As %
Agricultural and Biological Sciences 4 57%
Biochemistry, Genetics and Molecular Biology 2 29%
Unknown 1 14%