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Single Molecule Analysis

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Cover of 'Single Molecule Analysis'

Table of Contents

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    Book Overview
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    Chapter 1 Introduction to Optical Tweezers: Background, System Designs, and Commercial Solutions
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    Chapter 2 RNA Unzipping and Force Measurements with a Dual Optical Trap
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    Chapter 3 Protein Tethering for Folding Studies
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    Chapter 4 Combining Structure–Function and Single-Molecule Studies on Cytoplasmic Dynein
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    Chapter 5 A Brief Introduction to Single-Molecule Fluorescence Methods
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    Chapter 6 Fluorescent Labeling of Proteins
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    Chapter 7 Single-Molecule Imaging of Escherichia coli Transmembrane Proteins
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    Chapter 8 Single-Molecule Fluorescence Microscopy in Living Caenorhabditis elegans
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    Chapter 9 Purification and Application of a Small Actin Probe for Single-Molecule Localization Microscopy
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    Chapter 10 Fluorescence Microscopy of Nanochannel-Confined DNA
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    Chapter 11 Use of Single Molecule Fluorescence Polarization Microscopy to Study Protein Conformation and Dynamics of Kinesin–Microtubule Complexes
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    Chapter 12 Single Molecule FRET Analysis of DNA Binding Proteins
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    Chapter 13 Atomic Force Microscopy: An Introduction
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    Chapter 14 Imaging of DNA and Protein by SFM and Combined SFM-TIRF Microscopy
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    Chapter 15 Atomic Force Microscopy of Protein Shells: Virus Capsids and Beyond
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    Chapter 16 Combined Magnetic Tweezers and Micro-mirror Total Internal Reflection Fluorescence Microscope for Single-Molecule Manipulation and Visualization
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    Chapter 17 Tethered Particle Motion: An Easy Technique for Probing DNA Topology and Interactions with Transcription Factors
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    Chapter 18 Single-Molecule Measurements Using Acoustic Force Spectroscopy (AFS)
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    Chapter 19 Repurposing a Benchtop Centrifuge for High-Throughput Single-Molecule Force Spectroscopy
Attention for Chapter 19: Repurposing a Benchtop Centrifuge for High-Throughput Single-Molecule Force Spectroscopy
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Chapter title
Repurposing a Benchtop Centrifuge for High-Throughput Single-Molecule Force Spectroscopy
Chapter number 19
Book title
Single Molecule Analysis
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-7271-5_19
Pubmed ID
Book ISBNs
978-1-4939-7270-8, 978-1-4939-7271-5
Authors

Darren Yang, Wesley P. Wong

Abstract

We present high-throughput single-molecule manipulation using a benchtop centrifuge, overcoming limitations common in other single-molecule approaches such as high cost, low throughput, technical difficulty, and strict infrastructure requirements. An inexpensive and compact Centrifuge Force Microscope (CFM) adapted to a commercial centrifuge enables use by nonspecialists, and integration with DNA nanoswitches facilitates both reliable measurements and repeated molecular interrogation. Here, we provide detailed protocols for constructing the CFM, creating DNA nanoswitch samples, and carrying out single-molecule force measurements.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 6 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 6 100%

Demographic breakdown

Readers by professional status Count As %
Unspecified 1 17%
Researcher 1 17%
Student > Postgraduate 1 17%
Unknown 3 50%
Readers by discipline Count As %
Unspecified 1 17%
Biochemistry, Genetics and Molecular Biology 1 17%
Engineering 1 17%
Unknown 3 50%