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RNA-RNA Interactions

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Cover of 'RNA-RNA Interactions'

Table of Contents

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    Book Overview
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    Chapter 1 Identifying RNA Recombination Events and Non-covalent RNA-RNA Interactions with the Molecular Colony Technique.
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    Chapter 2 RNA-RNA Interactions
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    Chapter 3 RNA–RNA SELEX
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    Chapter 4 Identification of Antisense RNA Stem-Loops That Inhibit RNA-Protein Interactions Using a Bacterial Reporter System.
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    Chapter 5 Transactivation of Large Ribozymes
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    Chapter 6 Native Purification and Labeling of RNA for Single Molecule Fluorescence Studies
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    Chapter 7 Single Molecule Studies of RNA-RNA Interactions.
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    Chapter 8 Modification interference analysis of the ribosome.
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    Chapter 9 Assessing Intermolecular RNA:RNA Interactions Within a Ribonucleoprotein Complex Using Heavy Metal Cleavage Mapping.
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    Chapter 10 Electrophoretic Mobility Shift Assays: Analysis of tRNA Binding to the T Box Riboswitch Antiterminator RNA
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    Chapter 11 Fluorescence Anisotropy: Analysis of tRNA Binding to the T Box Riboswitch Antiterminator RNA
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    Chapter 12 Electrophoretic Mobility Shift Assay of RNA-RNA Complexes.
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    Chapter 13 Structural Studies of a Double-Stranded RNA from Trypanosome RNA Editing by Small-Angle X-Ray Scattering
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    Chapter 14 Fusion RNAs in Crystallographic Studies of Double-Stranded RNA from Trypanosome RNA Editing
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    Chapter 15 ERRATUM: Transactivation of Large Ribozymes
Attention for Chapter 7: Single Molecule Studies of RNA-RNA Interactions.
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Chapter title
Single Molecule Studies of RNA-RNA Interactions.
Chapter number 7
Book title
RNA-RNA Interactions
Published in
Methods in molecular biology, January 2015
DOI 10.1007/978-1-4939-1896-6_7
Pubmed ID
Book ISBNs
978-1-4939-1895-9, 978-1-4939-1896-6
Authors

Dongmei Yu, Peiwu Qin, Peter V Cornish, Peter V. Cornish

Abstract

Non-coding RNAs including microRNAs, siRNAs, and snoRNAs interact with their targets directly through RNA-RNA interactions by base-paring (van Himbergen et al., Nucleic Acids Res 21(8):1713-1717, 1993). RNA-RNA interactions play important roles in gene transcription and protein translation, which can be investigated with several experimental techniques including single molecule methods. Here, we describe how single molecule Förster resonance energy transfer (FRET) can be used to study RNA-RNA interactions in vitro by either surface immobilization or vesicle encapsulation.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 9 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 9 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 3 33%
Other 1 11%
Student > Bachelor 1 11%
Student > Doctoral Student 1 11%
Student > Master 1 11%
Other 1 11%
Unknown 1 11%
Readers by discipline Count As %
Agricultural and Biological Sciences 3 33%
Biochemistry, Genetics and Molecular Biology 2 22%
Social Sciences 1 11%
Chemistry 1 11%
Unknown 2 22%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 30 October 2014.
All research outputs
#20,241,019
of 22,768,097 outputs
Outputs from Methods in molecular biology
#9,865
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Outputs of similar age
#295,626
of 352,897 outputs
Outputs of similar age from Methods in molecular biology
#635
of 996 outputs
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So far Altmetric has tracked 13,090 research outputs from this source. They receive a mean Attention Score of 3.3. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
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We're also able to compare this research output to 996 others from the same source and published within six weeks on either side of this one. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.