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De-Novo Assembly and Analysis of the Heterozygous Triploid Genome of the Wine Spoilage Yeast Dekkera bruxellensis AWRI1499

Overview of attention for article published in PLOS ONE, March 2012
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (87th percentile)
  • High Attention Score compared to outputs of the same age and source (82nd percentile)

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4 X users
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2 patents

Citations

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105 Dimensions

Readers on

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154 Mendeley
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1 CiteULike
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Title
De-Novo Assembly and Analysis of the Heterozygous Triploid Genome of the Wine Spoilage Yeast Dekkera bruxellensis AWRI1499
Published in
PLOS ONE, March 2012
DOI 10.1371/journal.pone.0033840
Pubmed ID
Authors

Chris D. Curtin, Anthony R. Borneman, Paul J. Chambers, Isak S. Pretorius

Abstract

Despite its industrial importance, the yeast species Dekkera (Brettanomyces) bruxellensis has remained poorly understood at the genetic level. In this study we describe whole genome sequencing and analysis for a prevalent wine spoilage strain, AWRI1499. The 12.7 Mb assembly, consisting of 324 contigs in 99 scaffolds (super-contigs) at 26-fold coverage, exhibits a relatively high density of single nucleotide polymorphisms (SNPs). Haplotype sampling for 1.2% of open reading frames suggested that the D. bruxellensis AWRI1499 genome is comprised of a moderately heterozygous diploid genome, in combination with a divergent haploid genome. Gene content analysis revealed enrichment in membrane proteins, particularly transporters, along with oxidoreductase enzymes. Availability of this assembly and annotation provides a resource for further investigation of genomic organization in this species, and functional characterization of genes that may confer important phenotypic traits.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 154 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Canada 3 2%
France 2 1%
Norway 1 <1%
Netherlands 1 <1%
Australia 1 <1%
Uruguay 1 <1%
Egypt 1 <1%
Poland 1 <1%
Unknown 143 93%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 34 22%
Researcher 29 19%
Student > Master 23 15%
Student > Bachelor 14 9%
Professor 10 6%
Other 23 15%
Unknown 21 14%
Readers by discipline Count As %
Agricultural and Biological Sciences 85 55%
Biochemistry, Genetics and Molecular Biology 25 16%
Immunology and Microbiology 4 3%
Chemistry 3 2%
Environmental Science 2 1%
Other 6 4%
Unknown 29 19%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 10. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 27 April 2017.
All research outputs
#3,159,446
of 23,406,603 outputs
Outputs from PLOS ONE
#41,472
of 200,321 outputs
Outputs of similar age
#20,304
of 161,867 outputs
Outputs of similar age from PLOS ONE
#655
of 3,706 outputs
Altmetric has tracked 23,406,603 research outputs across all sources so far. Compared to these this one has done well and is in the 86th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 200,321 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 15.3. This one has done well, scoring higher than 79% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 161,867 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 87% of its contemporaries.
We're also able to compare this research output to 3,706 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 82% of its contemporaries.