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Computational Methods for GPCR Drug Discovery

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Cover of 'Computational Methods for GPCR Drug Discovery'

Table of Contents

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    Book Overview
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    Chapter 1 Current and Future Challenges in GPCR Drug Discovery
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    Chapter 2 Characterization of Ligand Binding to GPCRs Through Computational Methods
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    Chapter 3 Breakthrough in GPCR Crystallography and Its Impact on Computer-Aided Drug Design
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    Chapter 4 A Structural Framework for GPCR Chemogenomics: What’s In a Residue Number?
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    Chapter 5 GPCR Homology Model Generation for Lead Optimization
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    Chapter 6 GPCRs: What Can We Learn from Molecular Dynamics Simulations?
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    Chapter 7 Methods of Exploring Protein–Ligand Interactions to Guide Medicinal Chemistry Efforts
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    Chapter 8 Exploring GPCR-Ligand Interactions with the Fragment Molecular Orbital (FMO) Method
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    Chapter 9 Molecular Basis of Ligand Dissociation from G Protein-Coupled Receptors and Predicting Residence Time
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    Chapter 10 Methodologies for the Examination of Water in GPCRs
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    Chapter 11 Methods for Virtual Screening of GPCR Targets: Approaches and Challenges
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    Chapter 12 Approaches for Differentiation and Interconverting GPCR Agonists and Antagonists
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    Chapter 13 Opportunities and Challenges in the Discovery of Allosteric Modulators of GPCRs
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    Chapter 14 Challenges and Opportunities in Drug Discovery of Biased Ligands
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    Chapter 15 Synergistic Use of GPCR Modeling and SDM Experiments to Understand Ligand Binding
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    Chapter 16 Computational Support of Medicinal Chemistry in Industrial Settings
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    Chapter 17 Investigating Small-Molecule Ligand Binding to G Protein-Coupled Receptors with Biased or Unbiased Molecular Dynamics Simulations
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    Chapter 18 Ligand-Based Methods in GPCR Computer-Aided Drug Design
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    Chapter 19 Computational Methods Used in Hit-to-Lead and Lead Optimization Stages of Structure-Based Drug Discovery
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    Chapter 20 Cheminformatics in the Service of GPCR Drug Discovery
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    Chapter 21 Modeling and Deorphanization of Orphan GPCRs
Attention for Chapter 16: Computational Support of Medicinal Chemistry in Industrial Settings
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Chapter title
Computational Support of Medicinal Chemistry in Industrial Settings
Chapter number 16
Book title
Computational Methods for GPCR Drug Discovery
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-7465-8_16
Pubmed ID
Book ISBNs
978-1-4939-7464-1, 978-1-4939-7465-8
Authors

Daniel F. Ortwine

Abstract

The practice of computational chemistry in an industrial setting poses unique opportunities and challenges. Industrial computational chemists must manage large amounts of data, master modeling software, write scripts to perform custom calculations, and stay abreast of scientific advances in the field. Just as importantly, because computational chemists are full partners in the drug discovery effort at companies, in order to influence and streamline the drug discovery process, they must communicate effectively with medicinal chemists and other scientists to deliver results of their calculations in a timely fashion. The skills necessary to play this role require education that emphasizes a combination of chemistry, programming, and communication skills. Professors are encouraged to incorporate such training in their curriculum.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 12 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 12 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 4 33%
Student > Ph. D. Student 2 17%
Student > Bachelor 1 8%
Student > Doctoral Student 1 8%
Student > Postgraduate 1 8%
Other 0 0%
Unknown 3 25%
Readers by discipline Count As %
Agricultural and Biological Sciences 2 17%
Biochemistry, Genetics and Molecular Biology 2 17%
Pharmacology, Toxicology and Pharmaceutical Science 1 8%
Medicine and Dentistry 1 8%
Chemistry 1 8%
Other 0 0%
Unknown 5 42%