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Peptidomics

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Cover of 'Peptidomics'

Table of Contents

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    Book Overview
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    Chapter 1 Origins, Technological Development, and Applications of Peptidomics
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    Chapter 2 Brain Tissue Sample Stabilization and Extraction Strategies for Neuropeptidomics
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    Chapter 3 Isolation of Endogenous Peptides from Cultured Cell Conditioned Media for Mass Spectrometry
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    Chapter 4 Mass Spectrometric Identification of Endogenous Peptides
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    Chapter 5 Bioinformatics for Prohormone and Neuropeptide Discovery
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    Chapter 6 Substrate Capture Assay Using Inactive Oligopeptidases to Identify Novel Peptides
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    Chapter 7 Non-targeted Identification of d-Amino Acid-Containing Peptides Through Enzymatic Screening, Chiral Amino Acid Analysis, and LC-MS
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    Chapter 8 Quantitative Peptidomics: General Considerations
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    Chapter 9 Quantitative Peptidomics with Isotopic and Isobaric Tags
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    Chapter 10 Quantitative Peptidomics Using Reductive Methylation of Amines
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    Chapter 11 Metabolic Labeling to Quantify Drosophila Neuropeptides and Peptide Hormones
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    Chapter 12 Data Preprocessing, Visualization, and Statistical Analyses of Nontargeted Peptidomics Data from MALDI-MS
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    Chapter 13 Affinity Purification of Neuropeptide Precursors from Mice Lacking Carboxypeptidase E Activity
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    Chapter 14 Mass Spectrometry Based Immunopeptidomics for the Discovery of Cancer Neoantigens
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    Chapter 15 Milk Peptidomics to Identify Functional Peptides and for Quality Control of Dairy Products
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    Chapter 16 Neuropeptidomic Analysis of Zebrafish Brain
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    Chapter 17 Identification, Quantitation, and Imaging of the Crustacean Peptidome
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    Chapter 18 Identification of Endogenous Neuropeptides in the Nematode C. elegans Using Mass Spectrometry
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    Chapter 19 EndoProteoFASP as a Tool to Unveil the Peptidome-Protease Profile: Application to Salivary Diagnostics
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    Chapter 20 Methodology for Urine Peptidome Analysis Based on Nano-HPLC Coupled to Fourier Transform Ion Cyclotron Resonance Mass Spectrometry
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    Chapter 21 Identification of Components in Frog Skin Secretions with Therapeutic Potential as Antidiabetic Agents
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    Chapter 22 High-Accuracy Mass Spectrometry Based Screening Method for the Discovery of Cysteine Containing Peptides in Animal Venoms and Toxins
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    Chapter 23 Analysis of the Snake Venom Peptidome
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    Chapter 24 Identification of Peptides in Spider Venom Using Mass Spectrometry
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    Chapter 25 Single Cell Peptidomics: Approach for Peptide Identification by N-Terminal Peptide Derivatization
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    Chapter 26 Peptidomic Identification of Cysteine-Rich Peptides from Plants
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    Chapter 27 Analysis of Endogenous Peptide Pools of Physcomitrella patens Moss
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    Chapter 28 The Bright Future of Peptidomics
Attention for Chapter 3: Isolation of Endogenous Peptides from Cultured Cell Conditioned Media for Mass Spectrometry
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Chapter title
Isolation of Endogenous Peptides from Cultured Cell Conditioned Media for Mass Spectrometry
Chapter number 3
Book title
Peptidomics
Published by
Humana Press, New York, NY, February 2018
DOI 10.1007/978-1-4939-7537-2_3
Pubmed ID
Book ISBNs
978-1-4939-7536-5, 978-1-4939-7537-2
Authors

Kazuki Sasaki, Takashi Tsuchiya, Tsukasa Osaki

Abstract

Media conditioned by cultured cells represent an excellent source rich in endogenous peptides. Unbiased mass spectrometric analysis of the constituent peptides provides an opportunity to look into proteolytic events such as bioactive peptide processing, membrane protein ectodomain shedding, or even regulated intramembrane proteolysis. If conducted on a large scale, peptidomics has the potential to pinpoint primary cleavage sites. Here a method is described for isolating peptides from cultured cell conditioned media before mass spectrometry analysis.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 6 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 6 100%

Demographic breakdown

Readers by professional status Count As %
Other 2 33%
Student > Doctoral Student 1 17%
Student > Bachelor 1 17%
Student > Ph. D. Student 1 17%
Student > Postgraduate 1 17%
Other 0 0%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 3 50%
Agricultural and Biological Sciences 1 17%
Immunology and Microbiology 1 17%
Medicine and Dentistry 1 17%