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Antibiotics

Overview of attention for book
Cover of 'Antibiotics'

Table of Contents

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    Book Overview
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    Chapter 1 Antibiotics: Precious Goods in Changing Times
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    Chapter 2 Mining Bacterial Genomes for Secondary Metabolite Gene Clusters
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    Chapter 3 Production of Antimicrobial Compounds by Fermentation
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    Chapter 4 Structure Elucidation of Antibiotics by NMR Spectroscopy
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    Chapter 5 Computer-Aided Drug Design Methods
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    Chapter 6 Cytotoxicity Assays as Predictors of the Safety and Efficacy of Antimicrobial Agents
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    Chapter 7 Application of a Bacillus subtilis Whole-Cell Biosensor (PliaI-lux) for the Identification of Cell Wall Active Antibacterial Compounds
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    Chapter 8 Determination of Bacterial Membrane Impairment by Antimicrobial Agents
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    Chapter 9 Mass-Sensitive Biosensor Systems to Determine the Membrane Interaction of Analytes
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    Chapter 10 Measurement of Cell Membrane Fluidity by Laurdan GP: Fluorescence Spectroscopy and Microscopy
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    Chapter 11 In Vitro Assays to Identify Antibiotics Targeting DNA Metabolism
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    Chapter 12 Fluorescence-Based Real-Time Activity Assays to Identify RNase P Inhibitors
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    Chapter 13 Reporter Gene-Based Screening for TPP Riboswitch Activators
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    Chapter 14 Cell-Based Fluorescent Screen to Identify Inhibitors of Bacterial Translation Initiation
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    Chapter 15 Bacterial Histidine Kinases: Overexpression, Purification, and Inhibitor Screen
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    Chapter 16 Expression Profiling of Antibiotic-Resistant Bacteria Obtained by Laboratory Evolution
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    Chapter 17 Sample Preparation for Mass-Spectrometry Based Absolute Protein Quantification in Antibiotic Stress Research
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    Chapter 18 Label-Free Quantitation of Ribosomal Proteins from Bacillus subtilis for Antibiotic Research
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    Chapter 19 Functional Metagenomics to Study Antibiotic Resistance
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    Chapter 20 Epidemiological Surveillance and Typing Methods to Track Antibiotic Resistant Strains Using High Throughput Sequencing
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    Chapter 21 Erratum
Attention for Chapter 20: Epidemiological Surveillance and Typing Methods to Track Antibiotic Resistant Strains Using High Throughput Sequencing
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Chapter title
Epidemiological Surveillance and Typing Methods to Track Antibiotic Resistant Strains Using High Throughput Sequencing
Chapter number 20
Book title
Antibiotics
Published in
Methods in molecular biology, January 2017
DOI 10.1007/978-1-4939-6634-9_20
Pubmed ID
Book ISBNs
978-1-4939-6632-5, 978-1-4939-6634-9
Authors

Miguel Paulo Machado, Bruno Ribeiro-Gonçalves, Mickael Silva, Mário Ramirez, João André Carriço, Machado, Miguel Paulo, Ribeiro-Gonçalves, Bruno, Silva, Mickael, Ramirez, Mário, Carriço, João André

Editors

Peter Sass

Abstract

High-Throughput Sequencing (HTS) technologies transformed the microbial typing and molecular epidemiology field by providing the cost-effective ability for researchers to probe draft genomes, not only for epidemiological markers but also for antibiotic resistance and virulence determinants. In this chapter, we provide protocols for the analysis of HTS data for the determination of multilocus sequence typing (MLST) information and for determining presence or absence of antibiotic resistance genes.

X Demographics

X Demographics

The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 9 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 9 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 2 22%
Other 1 11%
Librarian 1 11%
Professor 1 11%
Student > Bachelor 1 11%
Other 0 0%
Unknown 3 33%
Readers by discipline Count As %
Immunology and Microbiology 3 33%
Economics, Econometrics and Finance 1 11%
Social Sciences 1 11%
Medicine and Dentistry 1 11%
Unknown 3 33%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 22 March 2017.
All research outputs
#20,356,726
of 25,837,817 outputs
Outputs from Methods in molecular biology
#8,511
of 14,362 outputs
Outputs of similar age
#308,886
of 425,363 outputs
Outputs of similar age from Methods in molecular biology
#659
of 1,088 outputs
Altmetric has tracked 25,837,817 research outputs across all sources so far. This one is in the 18th percentile – i.e., 18% of other outputs scored the same or lower than it.
So far Altmetric has tracked 14,362 research outputs from this source. They receive a mean Attention Score of 3.5. This one is in the 36th percentile – i.e., 36% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 425,363 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 23rd percentile – i.e., 23% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 1,088 others from the same source and published within six weeks on either side of this one. This one is in the 35th percentile – i.e., 35% of its contemporaries scored the same or lower than it.