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mRNA Processing

Overview of attention for book
Cover of 'mRNA Processing'

Table of Contents

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    Book Overview
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    Chapter 1 Detection and Identification of Uncapped RNA by Ligation-Mediated Reverse Transcription Polymerase Chain Reaction
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    Chapter 2 Preparation of Splicing Competent Nuclear Extract from Mammalian Cells and In Vitro Pre-mRNA Splicing Assay
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    Chapter 3 Single-Molecule Analysis of Pre-mRNA Splicing with Colocalization Single-Molecule Spectroscopy (CoSMoS)
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    Chapter 4 In Vitro Modulation of Endogenous Alternative Splicing Using Splice-Switching Antisense Oligonucleotides
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    Chapter 5 Purification of mRNA Processing Complexes Using an RNA Affinity Approach
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    Chapter 6 Polyadenylation Site-Based Analysis of Transcript Expression by 3′READS+
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    Chapter 7 Comprehensive Identification of mRNA Polyadenylation Sites by PAPERCLIP
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    Chapter 8 Microinjection and Fluorescence In Situ Hybridization Assay for Studying mRNA Export in Mammalian Cells
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    Chapter 9 Methods for the Detection of Adenosine-to-Inosine Editing Events in Cellular RNA
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    Chapter 10 Using RNA-Seq to Discover Genetic Polymorphisms That Produce Hidden Splice Variants
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    Chapter 11 Inducible Expression of Eukaryotic Circular RNAs from Plasmids
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    Chapter 12 Methods for Extraction of RNA, Proteins, or Protein Complexes from Subcellular Compartments of Eukaryotic Cells
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    Chapter 13 Isolation of Newly Transcribed RNA Using the Metabolic Label 4-Thiouridine
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    Chapter 14 Robust, Cost-Effective Profiling of RNA Binding Protein Targets with Single-end Enhanced Crosslinking and Immunoprecipitation (seCLIP)
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    Chapter 15 Purification of Transcript-Specific mRNP Complexes Formed In Vivo from Saccharomyces cerevisiae
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    Chapter 16 A Cell-Based High-Throughput Method for Identifying Modulators of Alternative Splicing
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    Chapter 17 Genome-Wide RNAi Screens for RNA Processing Events in Drosophila melanogaster S2 Cells
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    Chapter 18 Assaying RNA Structure Inside Living Cells with SHAPE
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    Chapter 19 Erratum to: Robust, Cost-Effective Profiling of RNA Binding Protein Targets with Single-end Enhanced Crosslinking and Immunoprecipitation (seCLIP)
Attention for Chapter 4: In Vitro Modulation of Endogenous Alternative Splicing Using Splice-Switching Antisense Oligonucleotides
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Chapter title
In Vitro Modulation of Endogenous Alternative Splicing Using Splice-Switching Antisense Oligonucleotides
Chapter number 4
Book title
mRNA Processing
Published in
Methods in molecular biology, January 2017
DOI 10.1007/978-1-4939-7204-3_4
Pubmed ID
Book ISBNs
978-1-4939-7203-6, 978-1-4939-7204-3
Authors

Jeong Eun Park, Luca Cartegni

Abstract

Regulation of alternative splicing can be harnessed by antisense-based compounds to control gene expression. Antisense-mediated splicing interference has become a valuable molecular tool to modulate endogenous alternative splicing patterns, to correct cryptic or aberrant splicing, to reduce gene expression by triggering nonsense-mediated mRNA decay, and to activate intronic polyadenylation, both in vitro and in vivo. Here, we describe methods to induce and analyze the modulation of RNA processing, using modified splice-switching antisense oligonucleotides, such as phosphorodiamidate morpholino (PMO).

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X Demographics

The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 14 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 14 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 4 29%
Professor 2 14%
Student > Postgraduate 2 14%
Student > Ph. D. Student 2 14%
Unspecified 1 7%
Other 2 14%
Unknown 1 7%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 5 36%
Agricultural and Biological Sciences 3 21%
Immunology and Microbiology 2 14%
Psychology 1 7%
Unspecified 1 7%
Other 0 0%
Unknown 2 14%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 03 August 2017.
All research outputs
#15,474,679
of 22,996,001 outputs
Outputs from Methods in molecular biology
#5,381
of 13,151 outputs
Outputs of similar age
#257,271
of 421,191 outputs
Outputs of similar age from Methods in molecular biology
#468
of 1,074 outputs
Altmetric has tracked 22,996,001 research outputs across all sources so far. This one is in the 22nd percentile – i.e., 22% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,151 research outputs from this source. They receive a mean Attention Score of 3.4. This one is in the 44th percentile – i.e., 44% of its peers scored the same or lower than it.
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