↓ Skip to main content

Borrelia burgdorferi

Overview of attention for book
Cover of 'Borrelia burgdorferi'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Genotyping Strains of Lyme Disease Agents Directly From Ticks, Blood, or Tissue
  3. Altmetric Badge
    Chapter 2 Species Identification and Phylogenetic Analysis of Borrelia burgdorferi Sensu Lato Using Molecular Biological Methods
  4. Altmetric Badge
    Chapter 3 Generation of Mammalian Host-Adapted Borrelia burgdorferi by Cultivation in Peritoneal Dialysis Membrane Chamber Implantation in Rats
  5. Altmetric Badge
    Chapter 4 Co-immunoprecipitation for Identifying Protein-Protein Interactions in Borrelia burgdorferi
  6. Altmetric Badge
    Chapter 5 Characterization of Borrelia burgdorferi Binding to Mammalian Cells and Extracellular Matrix
  7. Altmetric Badge
    Chapter 6 Analysis of Lipids and Lipid Rafts in Borrelia
  8. Altmetric Badge
    Chapter 7 Trace Element Analysis of Borrelia burgdorferi by Inductively Coupled Plasma-Sector Field Mass Spectrometry
  9. Altmetric Badge
    Chapter 8 Identification and Characterization of Borrelia burgdorferi Complement-Binding Proteins
  10. Altmetric Badge
    Chapter 9 Artificial Infection of Ticks with Borrelia burgdorferi Using a Microinjection Method and Their Detection In Vivo Using Quantitative PCR Targeting flaB RNA
  11. Altmetric Badge
    Chapter 10 Borrelia burgdorferi Microarray Analysis
  12. Altmetric Badge
    Chapter 11 Borrelia burgdorferi Transcriptome Analysis by RNA-Sequencing
  13. Altmetric Badge
    Chapter 12 Selection of Borrelia burgdorferi Promoter Sequences Active During Mammalian Infection Using In Vivo Expression Technology
  14. Altmetric Badge
    Chapter 13 Analysis of DNA and RNA Binding Properties of Borrelia burgdorferi Regulatory Proteins
  15. Altmetric Badge
    Chapter 14 Identification of Acetylated Proteins in Borrelia burgdorferi
  16. Altmetric Badge
    Chapter 15 Genetic Transformation and Complementation
  17. Altmetric Badge
    Chapter 16 Genome-Wide Mutagenesis in Borrelia burgdorferi
  18. Altmetric Badge
    Chapter 17 Generation of Conditional Mutants in Borrelia burgdorferi
  19. Altmetric Badge
    Chapter 18 Detection of Bioluminescent Borrelia burgdorferi from In Vitro Cultivation and During Murine Infection
  20. Altmetric Badge
    Chapter 19 Analysis of Borrelia burgdorferi Proteome and Protein–Protein Interactions
  21. Altmetric Badge
    Chapter 20 Two Photon Intravital Microscopy of Lyme Borrelia in Mice
  22. Altmetric Badge
    Chapter 21 Investigating Human Dendritic Cell Immune Responses to Borrelia burgdorferi
  23. Altmetric Badge
    Chapter 22 Phagocytosis Assays for Borrelia burgdorferi
  24. Altmetric Badge
    Chapter 23 Measuring Borrelia burgdorferi Motility and Chemotaxis
  25. Altmetric Badge
    Chapter 24 In Vitro Models of Cutaneous Inflammation
  26. Altmetric Badge
    Chapter 25 Magnetic Isolation of Phagosomes Containing Toll-Like Receptor Ligands
  27. Altmetric Badge
    Chapter 26 Xenodiagnosis Using Ixodes scapularis Larval Ticks in Humans
  28. Altmetric Badge
    Chapter 27 Recombinant E. coli Dualistic Role as an Antigen-adjuvant Delivery Vehicle for Oral Immunization
Attention for Chapter 11: Borrelia burgdorferi Transcriptome Analysis by RNA-Sequencing
Altmetric Badge

About this Attention Score

  • Average Attention Score compared to outputs of the same age
  • Good Attention Score compared to outputs of the same age and source (70th percentile)

Mentioned by

twitter
3 X users

Citations

dimensions_citation
3 Dimensions

Readers on

mendeley
6 Mendeley
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Chapter title
Borrelia burgdorferi Transcriptome Analysis by RNA-Sequencing
Chapter number 11
Book title
Borrelia burgdorferi
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-7383-5_11
Pubmed ID
Book ISBNs
978-1-4939-7382-8, 978-1-4939-7383-5
Authors

M Lybecker, KC Henderson

Abstract

Next-Generation Sequencing (NGS) has revolutionized transcriptomics studies in the last decade. Transcriptome analysis experiments using NGS-based RNA-sequencing have several advantages over DNA microarray analysis. Novel unannotated transcripts and transcriptional start sites can be identified. Differential gene expression can be determined on novel and annotated transcripts simultaneously, whereas DNA microarray analysis can only quantify changes of known genes. In the protocol below we describe an Illumina compatible ligation-based method for generating stranded cDNA libraries for total RNA and small RNA transcriptomes in Borrelia burgdorferi.

X Demographics

X Demographics

The data shown below were collected from the profiles of 3 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 6 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 6 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 2 33%
Professor 1 17%
Researcher 1 17%
Student > Master 1 17%
Unknown 1 17%
Readers by discipline Count As %
Immunology and Microbiology 2 33%
Biochemistry, Genetics and Molecular Biology 1 17%
Agricultural and Biological Sciences 1 17%
Computer Science 1 17%
Unknown 1 17%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 25 January 2020.
All research outputs
#15,815,423
of 25,483,400 outputs
Outputs from Methods in molecular biology
#4,505
of 14,221 outputs
Outputs of similar age
#248,398
of 450,166 outputs
Outputs of similar age from Methods in molecular biology
#410
of 1,486 outputs
Altmetric has tracked 25,483,400 research outputs across all sources so far. This one is in the 37th percentile – i.e., 37% of other outputs scored the same or lower than it.
So far Altmetric has tracked 14,221 research outputs from this source. They receive a mean Attention Score of 3.5. This one has gotten more attention than average, scoring higher than 66% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 450,166 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 43rd percentile – i.e., 43% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 1,486 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 70% of its contemporaries.