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Histone Variants

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Cover of 'Histone Variants'

Table of Contents

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    Book Overview
  2. Altmetric Badge
    Chapter 1 Methods for Preparing Nucleosomes Containing Histone Variants
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    Chapter 2 Characterization of Posttranslational Modifications on Histone Variants
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    Chapter 3 Purification of Histone Variant-Interacting Chaperone Complexes
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    Chapter 4 Detection of Histone Modification Dynamics during the Cell Cycle by MS-Based Proteomics
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    Chapter 5 Histone Native Chromatin Immunoprecipitation
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    Chapter 6 How to Tackle Challenging ChIP-Seq, with Long-Range Cross-Linking, Using ATRX as an Example
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    Chapter 7 time-ChIP: A Method to Determine Long-Term Locus-Specific Nucleosome Inheritance
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    Chapter 8 MINCE-Seq: Mapping In Vivo Nascent Chromatin with EdU and Sequencing
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    Chapter 9 RChIP-Seq: Chromatin-Associated RNA Sequencing in Developmentally Staged Mouse Testes
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    Chapter 10 Bioinformatic Analysis of Nucleosome and Histone Variant Positioning
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    Chapter 11 Imaging Newly Synthesized and Old Histone Variant Dynamics Dependent on Chaperones Using the SNAP-Tag System
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    Chapter 12 Real-Time De Novo Deposition of Centromeric Histone-Associated Proteins Using the Auxin-Inducible Degradation System
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    Chapter 13 Live Imaging of Parental Histone Variant Dynamics in UVC-Damaged Chromatin
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    Chapter 14 CRISPR/Cas9 Gene Editing of Human Histone H2A Variant H2AX and MacroH2A
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    Chapter 15 Studying the Evolution of Histone Variants Using Phylogeny
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    Chapter 16 Characterization of Post-Meiotic Male Germ Cell Genome Organizational States
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    Chapter 17 An Animal Model for Genetic Analysis of Multi-Gene Families: Cloning and Transgenesis of Large Tandemly Repeated Histone Gene Clusters
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    Chapter 18 Imaging and Quantitation of Assembly Dynamics of the Centromeric Histone H3 Variant CENP-A in Drosophila melanogaster Spermatocytes by Immunofluorescence and Fluorescence In-Situ Hybridization (Immuno-FISH)
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    Chapter 19 Probing the Function of Oncohistones Using Mutant Transgenes and Knock-In Mutations
Attention for Chapter 17: An Animal Model for Genetic Analysis of Multi-Gene Families: Cloning and Transgenesis of Large Tandemly Repeated Histone Gene Clusters
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Chapter title
An Animal Model for Genetic Analysis of Multi-Gene Families: Cloning and Transgenesis of Large Tandemly Repeated Histone Gene Clusters
Chapter number 17
Book title
Histone Variants
Published in
Methods in molecular biology, August 2018
DOI 10.1007/978-1-4939-8663-7_17
Pubmed ID
Book ISBNs
978-1-4939-8662-0, 978-1-4939-8663-7
Authors

Michael P. Meers, Mary Leatham-Jensen, Taylor J. R. Penke, Daniel J. McKay, Robert J. Duronio, A. Gregory Matera

Abstract

Histone post-translational modifications (PTMs) are thought to participate in a range of essential molecular and cellular processes, including gene expression, replication, and nuclear organization. Importantly, histone PTMs are also thought to be prime candidates for carriers of epigenetic information across cell cycles and generations. However, directly testing the necessity of histone PTMs themselves in these processes by mutagenesis has been extremely difficult to carry out because of the highly repetitive nature of histone genes in animal genomes. We developed a transgenic system to generate Drosophila melanogaster genotypes in which the entire complement of replication-dependent histone genes is mutant at a residue of interest. We built a BAC vector containing a visible marker for lineage tracking along with the capacity to clone large (60-100 kb) inserts that subsequently can be site-specifically integrated into the D. melanogaster genome. We demonstrate that artificial tandem arrays of the core 5 kb replication-dependent histone repeat can be generated with relative ease. This genetic platform represents the first histone replacement system to leverage a single tandem transgenic insertion for facile genetics and analysis of molecular and cellular phenotypes. We demonstrate the utility of our system for directly preventing histone residues from being modified, and studying the consequent phenotypes. This system can be generalized to the cloning and transgenic insertion of any tandemly repeated sequence of biological interest.

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Mendeley readers

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The data shown below were compiled from readership statistics for 10 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 10 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 2 20%
Researcher 2 20%
Professor 1 10%
Student > Master 1 10%
Student > Bachelor 1 10%
Other 0 0%
Unknown 3 30%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 5 50%
Agricultural and Biological Sciences 1 10%
Sports and Recreations 1 10%
Unknown 3 30%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 04 August 2018.
All research outputs
#19,015,492
of 23,577,654 outputs
Outputs from Methods in molecular biology
#8,199
of 13,410 outputs
Outputs of similar age
#256,033
of 331,963 outputs
Outputs of similar age from Methods in molecular biology
#136
of 193 outputs
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