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Plant Genomics

Overview of attention for book
Cover of 'Plant Genomics'

Table of Contents

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    Book Overview
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    Chapter 1 CRISPR/Cas-Mediated In Planta Gene Targeting
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    Chapter 2 User Guide for the LORE1 Insertion Mutant Resource
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    Chapter 3 Enabling Reverse Genetics in Medicago truncatula Using High-Throughput Sequencing for Tnt1 Flanking Sequence Recovery
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    Chapter 4 The Generation of Doubled Haploid Lines for QTL Mapping
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    Chapter 5 Assessing Distribution and Variation of Genome-Wide DNA Methylation Using Short-Read Sequencing
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    Chapter 6 Circular Chromosome Conformation Capture in Plants
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    Chapter 7 Genome-Wide Profiling of Histone Modifications and Histone Variants in Arabidopsis thaliana and Marchantia polymorpha
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    Chapter 8 Tissue-Specific Transcriptome Profiling in Arabidopsis Roots
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    Chapter 9 Sample Preparation Protocols for Protein Abundance, Acetylome, and Phosphoproteome Profiling of Plant Tissues
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    Chapter 10 Automated High-Throughput Root Phenotyping of Arabidopsis thaliana Under Nutrient Deficiency Conditions
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    Chapter 11 Large-Scale Phenotyping of Root Traits in the Model Legume Lotus japonicus
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    Chapter 12 Long-Term Confocal Imaging of Arabidopsis thaliana Roots for Simultaneous Quantification of Root Growth and Fluorescent Signals
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    Chapter 13 Identification of Protein–DNA Interactions Using Enhanced Yeast One-Hybrid Assays and a Semiautomated Approach
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    Chapter 14 Mapping Protein-Protein Interaction Using High-Throughput Yeast 2-Hybrid
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    Chapter 15 Mapping Protein–Protein Interactions Using Affinity Purification and Mass Spectrometry
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    Chapter 16 Measuring Protein Movement, Oligomerization State, and Protein-Protein Interaction in Arabidopsis Roots Using Scanning Fluorescence Correlation Spe..
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    Chapter 17 Studying Protein–Protein Interactions In Planta Using Advanced Fluorescence Microscopy
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    Chapter 18 Chemiluminescence-Based Detection of Peptide Activity and Peptide-Receptor Binding in Plants
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    Chapter 19 Application of Chemical Genomics to Plant–Bacteria Communication: A High-Throughput System to Identify Novel Molecules Modulating the Induction of Bacterial Virulence Genes by Plant Signals
Attention for Chapter 8: Tissue-Specific Transcriptome Profiling in Arabidopsis Roots
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  • High Attention Score compared to outputs of the same age and source (89th percentile)

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Chapter title
Tissue-Specific Transcriptome Profiling in Arabidopsis Roots
Chapter number 8
Book title
Plant Genomics
Published in
Methods in molecular biology, April 2017
DOI 10.1007/978-1-4939-7003-2_8
Pubmed ID
Book ISBNs
978-1-4939-7001-8, 978-1-4939-7003-2
Authors

Sparks, Erin E., Benfey, Philip N., Erin E. Sparks, Philip N. Benfey

Editors

Wolfgang Busch

Abstract

Spatiotemporal transcriptome profiles from specific tissues are critical for understanding plant development and responses to the environment. One approach to isolate specific tissues is fluorescence-activated cell sorting (FACS). In this chapter, we outline methods for the FACS isolation of root protoplasts followed by transcriptome profiling using RNA sequencing.

X Demographics

X Demographics

The data shown below were collected from the profiles of 8 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 7 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 7 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 2 29%
Student > Bachelor 1 14%
Student > Ph. D. Student 1 14%
Professor 1 14%
Student > Master 1 14%
Other 1 14%
Readers by discipline Count As %
Agricultural and Biological Sciences 4 57%
Biochemistry, Genetics and Molecular Biology 3 43%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 5. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 02 May 2017.
All research outputs
#6,340,076
of 22,965,074 outputs
Outputs from Methods in molecular biology
#1,894
of 13,137 outputs
Outputs of similar age
#100,703
of 309,748 outputs
Outputs of similar age from Methods in molecular biology
#29
of 264 outputs
Altmetric has tracked 22,965,074 research outputs across all sources so far. This one has received more attention than most of these and is in the 72nd percentile.
So far Altmetric has tracked 13,137 research outputs from this source. They receive a mean Attention Score of 3.4. This one has done well, scoring higher than 85% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 309,748 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 67% of its contemporaries.
We're also able to compare this research output to 264 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 89% of its contemporaries.