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Protein Tyrosine Phosphatases

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Cover of 'Protein Tyrosine Phosphatases'

Table of Contents

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    Book Overview
  2. Altmetric Badge
    Chapter 1 The Extended Family of Protein Tyrosine Phosphatases
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    Chapter 2 Global RT-PCR and RT-qPCR Analysis of the mRNA Expression of the Human PTPome
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    Chapter 3 Expression, Purification, and Kinetic Analysis of PTP Domains
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    Chapter 4 Peptide Microarrays for Real-Time Kinetic Profiling of Tyrosine Phosphatase Activity of Recombinant Phosphatases and Phosphatases in Lysates of Cells or Tissue Samples
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    Chapter 5 Tailor-Made Protein Tyrosine Phosphatases: In Vitro Site-Directed Mutagenesis of PTEN and PTPRZ-B
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    Chapter 6 Assays to Measure PTEN Lipid Phosphatase Activity In Vitro from Purified Enzyme or Immunoprecipitates
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    Chapter 7 Assessing the Biological Activity of the Glucan Phosphatase Laforin
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    Chapter 8 Discovery and Evaluation of PRL Trimer Disruptors for Novel Anticancer Agents
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    Chapter 9 Analyzing Pseudophosphatase Function
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    Chapter 10 Crystallization of PTP Domains
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    Chapter 11 NMR Spectroscopy to Study MAP Kinase Binding to MAP Kinase Phosphatases
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    Chapter 12 Visualizing and Quantitating the Spatiotemporal Regulation of Ras/ERK Signaling by Dual-Specificity Mitogen-Activated Protein Phosphatases (MKPs)
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    Chapter 13 Protein Tyrosine Phosphatases
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    Chapter 14 Use of Dominant-Negative/Substrate Trapping PTP Mutations to Search for PTP Interactors/Substrates
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    Chapter 15 Protein Tyrosine Phosphatases
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    Chapter 16 Production of Osteoclasts for Studying Protein Tyrosine Phosphatase Signaling
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    Chapter 17 Functional Analysis of Protein Tyrosine Phosphatases in Thrombosis and Hemostasis
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    Chapter 18 Functional Analysis of Dual-Specificity Protein Phosphatases in Angiogenesis
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    Chapter 19 Studying Protein-Tyrosine Phosphatases in Zebrafish
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    Chapter 20 Protein Tyrosine Phosphatases
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    Chapter 21 Protein Tyrosine Phosphatases
Attention for Chapter 1: The Extended Family of Protein Tyrosine Phosphatases
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Chapter title
The Extended Family of Protein Tyrosine Phosphatases
Chapter number 1
Book title
Protein Tyrosine Phosphatases
Published in
Methods in molecular biology, January 2016
DOI 10.1007/978-1-4939-3746-2_1
Pubmed ID
Book ISBNs
978-1-4939-3744-8, 978-1-4939-3746-2
Authors

Andrés Alonso, Caroline E. Nunes-Xavier, Yolanda Bayón, Rafael Pulido, Alonso, Andrés, Nunes-Xavier, Caroline E., Bayón, Yolanda, Pulido, Rafael

Abstract

In higher eukaryotes, the Tyr phosphorylation status of cellular proteins results from the coordinated action of Protein Tyrosine Kinases (PTKs) and Protein Tyrosine Phosphatases (PTPs). PTPs have emerged as highly regulated enzymes with diverse substrate specificity, and proteins with Tyr-dephosphorylation or Tyr-dephosphorylation-like properties can be clustered as the PTPome. This includes proteins from the PTP superfamily, which display a Cys-based catalytic mechanism, as well as enzymes from other gene families (Asp-based phosphatases, His-based phosphatases) that have converged in protein Tyr-dephosphorylation-related functions by using non-Cys-based catalytic mechanisms. Within the Cys-based members of the PTPome, classical PTPs dephosphorylate specific phosphoTyr (pTyr) residues from protein substrates, whereas VH1-like dual-specificity PTPs dephosphorylate pTyr, pSer, and pThr residues, as well as nonproteinaceous substrates, including phosphoinositides and phosphorylated carbohydrates. In addition, several PTPs have impaired catalytic activity as a result of amino acid substitutions at their active sites, but retain regulatory functions related with pTyr signaling. As a result of their relevant biological activity, many PTPs are linked to human disease, including cancer, neurodevelopmental, and metabolic diseases, making these proteins important drug targets and molecular markers in the clinic. Here, a brief overview on the biochemistry and physiology of the different groups of proteins that belong to the mammalian PTPome is presented.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 36 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 36 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 9 25%
Student > Ph. D. Student 7 19%
Student > Bachelor 6 17%
Student > Postgraduate 2 6%
Student > Master 2 6%
Other 2 6%
Unknown 8 22%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 13 36%
Agricultural and Biological Sciences 6 17%
Chemistry 3 8%
Neuroscience 2 6%
Pharmacology, Toxicology and Pharmaceutical Science 1 3%
Other 2 6%
Unknown 9 25%