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Histones

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Cover of 'Histones'

Table of Contents

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    Book Overview
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    Chapter 1 In Vitro Assembly of Nucleosomes for Binding/Remodeling Assays.
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    Chapter 2 An Assay for Measuring Histone Variant Exchange within Nucleosomes In Vitro.
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    Chapter 3 Purification of Yeast Native Reagents for the Analysis of Chromatin Function-I: Nucleosomes for Reconstitution and Manipulation of Histone Marks.
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    Chapter 4 Purification of Yeast Native Reagents for the Analysis of Chromatin Function-II: Multiprotein Complexes and Biochemical Assays.
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    Chapter 5 Histone Purification from Saccharomyces cerevisiae.
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    Chapter 6 Analytical Ultracentrifuge Analysis of Nucleosomes Assembled from Recombinant, Acid-Extracted, HPLC-Purified Histones.
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    Chapter 7 SILAC-Based Quantitative Strategies for Accurate Histone Posttranslational Modification Profiling Across Multiple Biological Samples.
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    Chapter 8 Characterization of Individual Histone Posttranslational Modifications and Their Combinatorial Patterns by Mass Spectrometry-Based Proteomics Strategies.
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    Chapter 9 Production and Purification of Antibodies Against Histone Modifications.
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    Chapter 10 Immunofluorescence of Histone Proteins.
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    Chapter 11 Acid-Urea Gel Electrophoresis and Western Blotting of Histones.
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    Chapter 12 Chromatin Immunoprecipitation of Histone Modifications in Fission Yeast.
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    Chapter 13 A Spiking Strategy for ChIP-chip Data Normalization in S. cerevisiae.
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    Chapter 14 High-Resolution Genome-Wide Mapping of Nucleosome Positioning and Occupancy Level Using Paired-End Sequencing Technology.
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    Chapter 15 Physarum polycephalum for Studying the Function of Histone Modifications In Vivo.
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    Chapter 16 A Method for Large-Scale Screening of Random Sequence Libraries to Determine the Function of Unstructured Regions from Essential Proteins.
Attention for Chapter 11: Acid-Urea Gel Electrophoresis and Western Blotting of Histones.
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Chapter title
Acid-Urea Gel Electrophoresis and Western Blotting of Histones.
Chapter number 11
Book title
Histones
Published in
Methods in molecular biology, January 2017
DOI 10.1007/978-1-4939-6630-1_11
Pubmed ID
Book ISBNs
978-1-4939-6628-8, 978-1-4939-6630-1
Authors

Catherine A. Hazzalin, Louis C. Mahadevan

Editors

Benoit Guillemette, Luc R. Gaudreau

Abstract

Acid-urea gel electrophoresis offers significant advantages over SDS-PAGE for analysis of post-translational protein modifications, being capable of resolving proteins of similar size but varying in charge. Hence, it can be used to separate protein variants with small charge-altering differences in primary sequence, and is particularly useful in the analysis of histones whose charge variation arises from post-translational modification, such as phosphorylation or acetylation. On acid-urea gels, histones that carry multiple modifications, each with a characteristic charge, are resolved into distinct bands, the so-called "histone ladder." Thus, the extent and distribution of different modification states of histones can be visualized. Here, we describe the analysis of histone H3 by acid-urea gel electrophoresis and western blotting.

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Mendeley readers

The data shown below were compiled from readership statistics for 20 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 20 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 4 20%
Student > Bachelor 3 15%
Student > Master 2 10%
Student > Doctoral Student 1 5%
Unspecified 1 5%
Other 2 10%
Unknown 7 35%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 7 35%
Agricultural and Biological Sciences 2 10%
Environmental Science 1 5%
Unspecified 1 5%
Mathematics 1 5%
Other 1 5%
Unknown 7 35%