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Modern Proteomics – Sample Preparation, Analysis and Practical Applications

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Cover of 'Modern Proteomics – Sample Preparation, Analysis and Practical Applications'

Table of Contents

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    Book Overview
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    Chapter 1 Proteomes, Their Compositions and Their Sources
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    Chapter 2 Protein Fractionation and Enrichment Prior to Proteomics Sample Preparation
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    Chapter 3 Sample Preparation for Mass Spectrometry-Based Proteomics; from Proteomes to Peptides
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    Chapter 4 Plant Structure and Specificity – Challenges and Sample Preparation Considerations for Proteomics
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    Chapter 5 Improving Proteome Coverage by Reducing Sample Complexity via Chromatography
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    Chapter 6 Database Search Engines: Paradigms, Challenges and Solutions
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    Chapter 7 Mass Analyzers and Mass Spectrometers
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    Chapter 8 Top-Down Mass Spectrometry: Proteomics to Proteoforms
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    Chapter 9 Platforms and Pipelines for Proteomics Data Analysis and Management
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    Chapter 10 Tandem Mass Spectrum Sequencing: An Alternative to Database Search Engines in Shotgun Proteomics
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    Chapter 11 Visualization, Inspection and Interpretation of Shotgun Proteomics Identification Results
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    Chapter 12 Protein Inference
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    Chapter 13 Modification Site Localization in Peptides
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    Chapter 14 Useful Web Resources
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    Chapter 15 Mass Spectrometry-Based Protein Quantification
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    Chapter 16 Bioinformatics Tools for Proteomics Data Interpretation
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    Chapter 17 Identification, Quantification, and Site Localization of Protein Posttranslational Modifications via Mass Spectrometry-Based Proteomics
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    Chapter 18 Protein-Protein Interaction Detection Via Mass Spectrometry-Based Proteomics
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    Chapter 19 Protein Structural Analysis via Mass Spectrometry-Based Proteomics
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    Chapter 20 Introduction to Clinical Proteomics
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    Chapter 21 Discovery of Candidate Biomarkers
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    Chapter 22 Statistical Approaches to Candidate Biomarker Panel Selection
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    Chapter 23 Qualification and Verification of Protein Biomarker Candidates
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    Chapter 24 Protocol for Standardizing High-to-Moderate Abundance Protein Biomarker Assessments Through an MRM-with-Standard-Peptides Quantitative Approach
Attention for Chapter 24: Protocol for Standardizing High-to-Moderate Abundance Protein Biomarker Assessments Through an MRM-with-Standard-Peptides Quantitative Approach
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