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Bacterial Chemosensing

Overview of attention for book
Cover of 'Bacterial Chemosensing'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 The Diversity of Bacterial Chemosensing
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    Chapter 2 Transmembrane Signal Transduction in Bacterial Chemosensing
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    Chapter 3 Two Spatial Chemotaxis Assays: The Nutrient-Depleted Chemotaxis Assay and the Agarose-Plug-Bridge Assay
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    Chapter 4 Quantification of Bacterial Chemotaxis Responses at the Mouths of Hydrogel Capillaries
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    Chapter 5 A Static Microfluidic Device for Investigating the Chemotaxis Response to Stable, Non-linear Gradients
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    Chapter 6 Visualizing Chemoattraction of Planktonic Cells to a Biofilm
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    Chapter 7 Labeling Bacterial Flagella with Fluorescent Dyes
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    Chapter 8 All-Codon Mutagenesis for Structure-Function Studies of Chemotaxis Signaling Proteins
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    Chapter 9 Mutational Analysis of Binding Protein–Chemoreceptor Interactions
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    Chapter 10 In Vitro Assay for Measuring Receptor-Kinase Activity in the Bacillus subtilis Chemotaxis Pathway
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    Chapter 11 FRET Analysis of the Chemotaxis Pathway Response
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    Chapter 12 Monitoring Two-Component Sensor Kinases with a Chemotaxis Signal Readout
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    Chapter 13 Analyzing Protein Domain Interactions in Chemoreceptors by In Vivo PEGylation
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    Chapter 14 Tuning Chemoreceptor Signaling by Positioning Aromatic Residues at the Lipid–Aqueous Interface
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    Chapter 15 Analyzing Chemoreceptor Interactions In Vivo with the Trifunctional Cross-Linker TMEA
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    Chapter 16 Use of Cryo-EM to Study the Structure of Chemoreceptor Arrays In Vivo
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    Chapter 17 Visualizing Chemoreceptor Arrays in Bacterial Minicells by Cryo-Electron Tomography and Subtomogram Analysis
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    Chapter 18 Bacterial Chemoreceptor Imaging at High Spatiotemporal Resolution Using Photoconvertible Fluorescent Proteins
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    Chapter 19 Imaging of Single Dye-Labeled Chemotaxis Proteins in Live Bacteria Using Electroporation
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    Chapter 20 Fluorescence Anisotropy to Detect In Vivo Stimulus-Induced Changes in Chemoreceptor Packing
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    Chapter 21 Chemotaxis to Atypical Chemoattractants by Soil Bacteria
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    Chapter 22 Screening Chemoreceptor–Ligand Interactions by High-Throughput Thermal-Shift Assays
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    Chapter 23 High-Throughput Screening to Identify Chemoreceptor Ligands
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    Chapter 24 Identification of Specific Ligands for Sensory Receptors by Small-Molecule Ligand Arrays and Surface Plasmon Resonance
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    Chapter 25 Fluorescence Measurement of Kinetics of CheY Autophosphorylation with Small Molecule Phosphodonors
  27. Altmetric Badge
    Chapter 26 Synthesis of a Stable Analog of the Phosphorylated Form of CheY: Phosphono-CheY
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    Chapter 27 Quantitative Modeling of Flagellar Motor-Mediated Adaptation
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    Chapter 28 Molecular Modeling of Chemoreceptor:Ligand Interactions
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    Chapter 29 Phylogenetic and Protein Sequence Analysis of Bacterial Chemoreceptors
Attention for Chapter 23: High-Throughput Screening to Identify Chemoreceptor Ligands
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • Good Attention Score compared to outputs of the same age (77th percentile)
  • High Attention Score compared to outputs of the same age and source (92nd percentile)

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Chapter title
High-Throughput Screening to Identify Chemoreceptor Ligands
Chapter number 23
Book title
Bacterial Chemosensing
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-7577-8_23
Pubmed ID
Book ISBNs
978-1-4939-7576-1, 978-1-4939-7577-8
Authors

Matilde Fernández, Álvaro Ortega, Miriam Rico-Jiménez, David Martín-Mora, Abdelali Daddaoua, Miguel A. Matilla, Tino Krell

Abstract

The majority of bacterial chemoreceptors remain functionally un-annotated. The knowledge of chemoreceptor function, however, is indispensable to understanding the evolution of the chemotaxis system in bacteria with different lifestyles. Significant progress in the annotation of chemoreceptor function has been made using experimental strategies that are based on the individual, genetically engineered ligand binding domain (LBD) of chemoreceptors. There is now evidence that all major classes of LBDs can be produced as individual domains that retain their ligand binding activity. Here, we provide a protocol for the combined use of high-throughput ligand screening using Differential Scanning Fluorimetry followed by Isothermal Titration Calorimetry to identify and characterize ligands that bind to recombinant chemoreceptor LBDs. This approach has been shown to be very efficient for determining the function of novel chemoreceptors.

X Demographics

X Demographics

The data shown below were collected from the profiles of 13 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 27 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 27 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 6 22%
Student > Ph. D. Student 4 15%
Lecturer 2 7%
Student > Doctoral Student 1 4%
Student > Bachelor 1 4%
Other 3 11%
Unknown 10 37%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 9 33%
Agricultural and Biological Sciences 5 19%
Immunology and Microbiology 3 11%
Nursing and Health Professions 1 4%
Design 1 4%
Other 0 0%
Unknown 8 30%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 7. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 23 February 2018.
All research outputs
#5,072,447
of 25,255,356 outputs
Outputs from Methods in molecular biology
#1,447
of 14,164 outputs
Outputs of similar age
#102,130
of 455,683 outputs
Outputs of similar age from Methods in molecular biology
#115
of 1,486 outputs
Altmetric has tracked 25,255,356 research outputs across all sources so far. Compared to these this one has done well and is in the 79th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 14,164 research outputs from this source. They receive a mean Attention Score of 3.5. This one has done well, scoring higher than 89% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 455,683 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 77% of its contemporaries.
We're also able to compare this research output to 1,486 others from the same source and published within six weeks on either side of this one. This one has done particularly well, scoring higher than 92% of its contemporaries.