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Mendeley readers
Chapter title |
Computational Analysis of Genome-Wide ARGONAUTE-Dependent DNA Methylation in Plants
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Chapter number | 16 |
Book title |
Plant Argonaute Proteins
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Published in |
Methods in molecular biology, June 2017
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DOI | 10.1007/978-1-4939-7165-7_16 |
Pubmed ID | |
Book ISBNs |
978-1-4939-7164-0, 978-1-4939-7165-7
|
Authors |
Kai Tang, Cheng-Guo Duan, Huiming Zhang, Jian-Kang Zhu |
Editors |
Alberto Carbonell |
Abstract |
Whole-genome bisulfite sequencing (WGBS) has become a powerful tool to dissect genome-wide methylation profiles at single-base resolution. In this chapter we describe in detail the bioinformatics pipeline used for the analysis of ARGONAUTE-dependent DNA methylation in Arabidopsis thaliana. We provide tools and command lines used for mapping bisulfite sequencing reads, for estimating methylation levels at individual cytosine sites, for identifying differentially methylated regions (DMRs), and for calculating methylation levels of DMRs. |
Mendeley readers
The data shown below were compiled from readership statistics for 8 Mendeley readers of this research output. Click here to see the associated Mendeley record.
Geographical breakdown
Country | Count | As % |
---|---|---|
Unknown | 8 | 100% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Researcher | 5 | 63% |
Student > Postgraduate | 1 | 13% |
Unknown | 2 | 25% |
Readers by discipline | Count | As % |
---|---|---|
Biochemistry, Genetics and Molecular Biology | 4 | 50% |
Nursing and Health Professions | 1 | 13% |
Unknown | 3 | 38% |